 |
| Job Description | P0AFJ5 | | Confidence | 74.03% | Date | Thu Jan 5 11:26:30 GMT 2012 |
| Rank | 226 | Aligned Residues | 56 |
| % Identity | 21% | Template | c2y75F_ |
| PDB info |
PDB header:transcription | Chain: F: PDB Molecule:hth-type transcriptional regulator cymr; |
PDBTitle: the structure of cymr (yrzc) the global cysteine regulator2 of b. subtilis
|
| Resolution | 2.00 Å |
|
| | |
161 | . | . | . | . | . | . | . | . | 170 | . | . | |
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
|
. | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | |
|
|
|
|
|
| . | | | | | | | | | | | | |
|
|
|
|
|
|
|
| | | | | | | | | | | | | |
|
|
|
|
| | | |  | | | |  |
|
|
| . | . |
|
| | |
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| Query Sequence | |
K | L | L | H | F | F | M | T | H | P | E | R | . |
V | Y | S | R | E | Q | L | L | N | H | V | W | G | T | N | V | Y | V | E | D | R | T | V | D | V | H | I | R | R | L | R | K | A | L | E | P | G | G | H | D | R | M | V | Q | T | V | R | G | T | . |
. |
G | Y | R | F | S | T | R |
| Query Conservation | |
|
|
| | |
| | | | | | | . |
| |
| | | |
| | | |
| | | | | | | | | | |
|
| | | |
| |
|
|
| |
|
| | | | | | | | |
| |
|
| |
| | . | . |
|
| |
| | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| Template Conservation | |
| |
| | |
|
| | | | | | | | |
| | | |
|
| | | | . | . | . | . | . | |
| | | | |
| |
|
|
| | |
| | | |
| . | . | . | . | . | . | . |
|
| |
| | |
| | |
|
|
| |
| |
| |
| Template Sequence | |
T | I | M | I | E | L | A | K | K | H | G | E | G | P | T | S | L | K | S | I | A | Q | T | N | . |
. |
. |
. |
. |
N | L | S | E | H | Y | L | E | Q | L | V | S | P | L | R | N | A | G | . |
. |
. |
. |
. |
. |
. |
L | V | K | S | I | R | G | A | Y | G | G | Y | V | L | G | S | E |
| Template Known Secondary structure | |
| | | | | | | | T | T | T | S |
|
| B |
| | | | | | | | T | . | . | . | . | . | T | S |
| | | | | | | | | | | | | | T | T | . | . | . | . | . | . | . | S | | | | |
| S | T | T |
| | | | | S | S |
|
| Template Predicted Secondary structure | |
| | | | | | | |
|
|
|
|
|
|
|
| | | | | | | | | . | . | . | . | . |
|
|
| | | | | | | | | | | | | |
|
| . | . | . | . | . | . | . |
| | | | | |
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
