Job Description P0AFJ5 Confidence 40.55% Date Thu Jan 5 11:26:30 GMT 2012 Rank 348 Aligned Residues 125 % Identity 8% Template c2v6jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna helicase; PDBTitle: kokobera virus helicase: mutant met47thr Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																															.	.	.	.	.																	.	.	.	.									.
Query SS confidence																															.	.	.	.	.																	.	.	.	.									.
Query Sequence		A	R	R	I	L	V	V	E	D	E	A	P	I	R	E	M	V	C	F	V	L	E	Q	N	G	F	Q	P	V	.	.	.	.	.	E	A	E	D	Y	D	S	A	V	N	Q	L	N	E	P	W	.	.	.	.	P	D	L	I	L	L	D	W	.	M	L	P	G	G	S	G	I	Q	F	I	K	H	L	K	R	E
Query Conservation																															.	.	.	.	.																	.	.	.	.									.
Alig confidence																															.	.	.	.	.																	.	.	.	.									.
Template Conservation
Template Sequence		R	L	R	T	V	I	L	A	P	T	R	V	V	A	S	E	T	Y	E	A	L	R	G	E	P	I	R	Y	M	G	N	E	I	V	D	F	M	C	H	S	T	F	T	M	K	L	L	Q	G	V	R	V	P	N	Y	N	L	Y	I	M	D	E	A	H	F	L	D	P	A	S	V	A	A	R	G	Y	I	E	T	R
Template Known Secondary structure		T								S	S											T	T	T	S									S																T							S						T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	T	R	D	I	P	V	V	M	L	T	A	R	G	E	E	E	D	R	V	R	G	L	E	T	G	A	D	D	Y	I	T	K	P	F	S	P	K	E	L	V	A	R	I	K	A	V	M	R	R	I	S	P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	M	G	D	A	G	A	I	F	M	T	A	T	P	P	G	T	T	E	A	F	P	P	S	N	S	P	I	I	D	E	E	T	R	I	P	D	K	A	W	N	S	G	Y	E	W	I	T	E	F	D	G	R	T
Template Known Secondary structure					T	S								S	S		T	T				S	S				S	S											S	S			S	S							S		S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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