Job Description P0AFJ5 Confidence 42.54% Date Thu Jan 5 11:26:30 GMT 2012 Rank 336 Aligned Residues 63 % Identity 14% Template c2it0A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		E	M	G	P	T	E	F	K	L	L	H	F	F	M	T	.	.	H	P	E	R	V	Y	S	R	E	Q	L	L	N	H	V	W	G	T	N	V	Y	V	E	D	R	T	V	D	V	H	I	R	R	L	R	K	A	L	E	P	G	G	H	D	R	M	V	Q	T	V	R	G	T	G	Y	R	F	S	T	R
Query Conservation																	.	.
Alig confidence																	.	.																.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		E	L	V	D	T	T	E	M	Y	L	R	T	I	Y	D	L	E	E	E	G	V	T	P	L	R	A	R	I	A	E	R	L	.	.	.	.	.	D	Q	S	G	P	T	V	S	Q	T	V	S	R	M	E	R	D	G	.	.	.	.	.	.	.	L	L	R	V	A	G	D	R	H	L	E	L	T	E	K
Template Known Secondary structure				S	S															T	T												T	.	.	.	.	.	T																T	T	.	.	.	.	.	.	.	S					T	T
Template Predicted Secondary structure																																		.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions