Job Description P0AFJ5 Confidence 51.10% Date Thu Jan 5 11:26:30 GMT 2012 Rank 303 Aligned Residues 65 % Identity 11% Template c2dbbA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 Resolution 2.00 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	G	P	T	E	F	K	L	L	H	F	F	M	T	H	P	E	R	V	Y	S	R	E	Q	L	L	N	H	V	W	G	T	N	V	Y	V	E	D	R	T	V	D	V	H	I	R	R	L	R	K	A	L	E	P	G	G	H	D	R	M	V	Q	T	V	R	G	T	G	Y	R	F	S
Query Conservation
Alig confidence																					.	.										.	.	.	.	.																														.
Template Conservation																					.	.										.	.	.	.	.																														.
Template Sequence		K	L	D	R	V	D	M	Q	L	V	K	I	L	S	E	N	S	R	L	.	.	T	Y	R	E	L	A	D	I	L	.	.	.	.	.	N	T	T	R	Q	R	I	A	R	R	I	D	K	L	K	K	L	G	I	I	R	K	F	T	I	I	P	D	I	.	D	K	L	G	Y	M	Y	A
Template Known Secondary structure																		T	T		.	.									T	.	.	.	.	.	T	S																T	S	S									T	.	G	G	G	T
Template Predicted Secondary structure																					.	.										.	.	.	.	.																														.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions