Return to main results Retrieve Phyre Job Id

Job DescriptionP0A812
Confidence99.96%DateThu Jan 5 11:06:35 GMT 2012
Rank11Aligned Residues204
% Identity24%Templated1sxjb2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  RAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAM
Query Conservation   
 

    



 
     
   
            


 










  

  
      
              
Alig confidence 



























.....














































Template Conservation   

 
    



       
   
   .....     

 

 
 


 

  

                        
Template Sequence  EKYRPQVLSDIVGNKETIDRLQQIAKDG. . . . . NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGID
Template Known Secondary structure  T

SSGGG

S
TS
.....




STTSSGGG
TTS

S
Template Predicted Secondary structure 








.....























Template SS confidence 















































































   13......20.........30.........40 .........50.........60.........70.........80.......
 
   101... .....110.........120.........130.........140.........150.........160......
Predicted Secondary structure 
..............



















Query SS confidence 



. . . . . . . . . . . . . .





























































Query Sequence  LTNL. . . . . . . . . . . . . . EPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGS
Query Conservation      ..............        

   
                                       
        
Alig confidence 



..............





























..................













Template Conservation                           

                     ..................     
        
Template Sequence  VVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYS. . . . . . . . . . . . . . . . . . NSTRFAFACNQSNK
Template Known Secondary structure  T





TT

SGGGS
TTTT..................TTS
GGG
Template Predicted Secondary structure 
















..................







Template SS confidence 















































































   88.90.........100.........110.........120.........130..... ....140.........
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADI
Query Conservation                            
                  

    
  
 
  

      
       
    
Alig confidence 











.




















































.....








Template Conservation         
    .            

  
   
        
  
   
 

 
 

  
     .....    
    
Template Sequence  IIEPLQSQCAIL. RYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVA. . . . . GHGLVNADN
Template Known Secondary structure  S
TTS.




T

B
TT
.....SSB
Template Predicted Secondary structure 



.














.....





Template SS confidence 















































































   150.........160. ........170.........180.........190.........200.........210.... .....220...
 
   247..250...
Predicted Secondary structure 
Query SS confidence 






Query Sequence  AAQALDM
Query Conservation      
  
Alig confidence 






Template Conservation 
  
  
Template Sequence  VFKIVDS
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 






   224.....230
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions