Return to main results Retrieve Phyre Job Id

Job DescriptionP0A812
Confidence99.92%DateThu Jan 5 11:06:35 GMT 2012
Rank36Aligned Residues216
% Identity23%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RPK. LLEEYVGQPQVRSQMEIFIKAAKLR. . . . . . . GDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEK. .
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Template Sequence  APKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMF
Template Known Secondary structure 

S

GGG

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TT



S

TTSSTT

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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   94.....100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  . . . . . . AGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSL
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Template Sequence  VGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQL. . . . . . . . . . . LVEMDGFEKDTAIVVMAATNRPDIL
Template Known Secondary structure  TTTTSSST

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   230.........240.........250.........260.........270... ......280.........290........
 
   168.170... ......180.........190.........200.........210........ .220.........230.........240....
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Query Sequence  TSPLRD. . RFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG. TPRIANRLLRRVRDFAEVKHDGTISA
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Template Sequence  DPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVD. LALLAKRTPGFVGADLENLLNEAALLAAREGRRKITM
Template Known Secondary structure 
GGGGSTTSS


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TTS
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   308.310.........320.........330.........340......... 350.........360.........370.........380......
 
   245....250.
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Query Sequence  DIAAQAL
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Template Conservation   
   
 
Template Sequence  KDLEEAA
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   387..390...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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