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Job DescriptionP0A812
Confidence99.86%DateThu Jan 5 11:06:35 GMT 2012
Rank53Aligned Residues222
% Identity22%Templated1g8pa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.. ...30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  RPK. LLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAM. .
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Template Sequence  RPVFPFSAIVGQEDMKLALLLTAVDPG. . . . . IGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWA
Template Known Secondary structure 




GGGS
S

GG.....G



GGG
TTS

TT
TT

SSGGGS
TT
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   18.20.........30.........40.... .....50.........60.........70.........80.........90..
 
   101........110.........120.........130....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQ
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Template Sequence  TVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGE
Template Known Secondary structure 

S






TT




GGG

TTTTGGGS
S
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   135....140.........150.........160.........170.........180.........190.......
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Query Sequence  LDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSA. . . . . . . . . . . . . . . . .
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Template Sequence  NVVERDGLSI. . . . RHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPK
Template Known Secondary structure 

TT

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S
S



TT
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S
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   173......180.. .......190.........200.........210.........220.........230.........240........
 
   198.200.........210...... ...220.........230.........240.........250....
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Query Sequence  . . . . . . . . . . . . . RFMGLEMSDDGALEVARRA. . . . RGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDML
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Template Sequence  DMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMA
Template Known Secondary structure  GGG
B

SSS
STT
SB

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   249250.........260.........270.........280.........290.........300.........310.........320..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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