Job Description P0A812 Confidence 99.81% Date Thu Jan 5 11:06:35 GMT 2012 Rank 65 Aligned Residues 208 % Identity 11% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.
Query Sequence		E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	.	.	.	.	.	.	.	.	G	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M
Query Conservation																																																					.	.	.	.	.	.	.	.
Alig confidence																												.																									.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		E	L	L	K	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	.	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K
Template Known Secondary structure																								T	T			.										S																	T	T	T	T	T	S	S										T	T
Template Predicted Secondary structure																												.
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.		.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		101	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure						.	.	.	.	.																																														.	.																							.	.
Query SS confidence						.	.	.	.	.																																														.	.																							.	.
Query Sequence		L	T	N	L	.	.	.	.	.	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	.	.	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T	S	P	L	.	.
Query Conservation						.	.	.	.	.																																														.	.																							.	.
Alig confidence						.	.	.	.	.																																														.	.																							.	.
Template Conservation
Template Sequence		I	W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	K	N	S	K	L	S	I	I	C	V	G	G	H	N	V	T	I	R	E	Q	I	N	I
Template Known Secondary structure							S																		S		G	G	G	S											S	S	S			T													S	S											S	S									T
Template Predicted Secondary structure
Template SS confidence
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
					172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																												.	.	.	.	.	.	210	.	.	.	.	.	.				.	.
Predicted Secondary structure		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		.	.	.	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	D	D	G	A	L	E	V	A	R	R	A	.	.	.	R	G
Query Conservation		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	V	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I	T	Q	L	I	A	K	N	V	A	N	V	S	G
Template Known Secondary structure							T	T																																			T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	R	I	A	N	R	L	L	R	R	V	R	D	F	A	E	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	E	K	A	F	K	I	C	E	A	A	V	E	I	S	K	K	D
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		798	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions