Job Description P0A812 Confidence 99.57% Date Thu Jan 5 11:06:35 GMT 2012 Rank 89 Aligned Residues 212 % Identity 23% Template c3m6aC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain Resolution 3.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	.	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M	L	T	N	L	E	P
Query Conservation																																	.
Alig confidence																																	.																																.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		D	E	E	H	H	G	L	E	K	V	K	E	R	I	L	E	Y	L	A	V	Q	K	L	T	K	S	L	K	G	P	I	L	C	L	A	G	P	P	G	V	G	K	T	S	L	A	K	S	I	A	K	S	L	G	R	K	F	V	R	I	S	L	G	.	.	.	.	G	R	I	I	Q	G	M	K	K	A	G	K	L
Template Known Secondary structure						S	S																		S	S	S			S							S	S	S	S	S	S													T										.	.	.	.									T	T		S	S
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T	S	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.																																	.
Template Conservation																																	.	.	.	.	.	.	.	.																																	.
Template Sequence		N	P	V	F	L	L	D	E	I	D	K	M	S	A	M	L	E	V	L	D	P	E	Q	N	S	S	F	S	D	H	Y	.	.	.	.	.	.	.	.	I	E	E	T	F	D	L	S	K	V	L	F	I	A	T	A	N	N	L	A	T	I	P	G	P	L	R	D	R	M	E	I	.	I	N	I	A	G	Y	T	E
Template Known Secondary structure		S								S	S	S					G	G	G	T		T	T	T	T	T	B				S	S	.	.	.	.	.	.	.	.	S					B		S	S								S	S	T	T	T	S											.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.									.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.											.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																				.	.																					.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																				.	.																					.	.	.	.	.	.
Query Sequence		P	D	L	Q	Y	I	V	S	R	S	A	.	.	.	.	.	.	.	.	.	.	R	F	M	G	L	E	M	S	D	D	G	A	L	E	V	A	R	R	A	.	.	R	G	T	P	R	I	A	N	R	L	L	R	R	V	R	D	F	A	E	V	.	.	.	.	.	.	K	H	D	G	T	I	S	A	D	I	A	A
Query Conservation													.	.	.	.	.	.	.	.	.	.																				.	.																					.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																				.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	K	L	E	I	V	K	D	H	L	L	P	K	Q	I	K	E	H	G	L	K	K	S	N	L	Q	L	R	D	Q	A	I	L	D	I	I	R	Y	Y	T	R	E	A	G	V	R	S	L	E	R	Q	L	A	A	I	C	R	K	A	A	K	A	I	V	A	E	E	R	K	R	I	T	V	T	E	K	N	L	Q
Template Known Secondary structure											T									T				G	G	G																			S	S	S																				T	T			S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
		249	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	I	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		575	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions