Job Description P0A812 Confidence 99.83% Date Thu Jan 5 11:06:35 GMT 2012 Rank 59 Aligned Residues 236 % Identity 26% Template c3k1jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent protease lon; PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1 Resolution 2.00 Å

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		11	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		G	T	T	L	P	.	.	.	.	.	E	D	V	A	D	R	A	I	R	P	K	L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	L	R	T
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		G	E	S	L	E	L	G	I	E	F	T	T	T	E	E	I	E	V	P	E	K	L	I	D	Q	V	I	G	Q	E	H	A	V	E	V	I	K	T	A	A	N	Q	K	.	.	.	.	.	.	.	R	H	V	L	L	I	G	E	P	G	T	G	K	S	M	L	G	Q	A	M	A	E	L	L	P	T	E	T	L	E
Template Known Secondary structure								S	S			S	B	G	G	G	S				S	S							S														T	T	.	.	.	.	.	.	.									T	T	S	S											T	S			S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		86	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	G	P	V	L	E	K	A	G	D	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	L	V	F	P	N	P	E	D	E	N	M	P	R	I	K	T	V	P	A	C	Q	G	R	R	I	V	E	K	Y	R	E	K	A	K	S	Q	E	S	V	L	V	P	K	L	L	V	D	N	C	G	R	T	K	A	P	F	I	D	A	T	G	A	H	A	G	A	L	L	G	D	V	R	H	D	P	F	L	G
Template Known Secondary structure									T	T		T	T	S								T	T																	T												T	T		S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
										99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.			.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																								.	.	.										.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																								.	.	.										.	.
Query Sequence		.	.	.	.	.	.	.	.	A	M	L	T	N	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	.	.	.	P	F	T	L	I	G	A	T	T	.	.	R	A	G
Query Conservation		.	.	.	.	.	.	.	.																																																								.	.	.										.	.
Alig confidence		.	.	.	.	.	.	.	.																																																								.	.	.										.	.
Template Conservation
Template Sequence		T	P	A	H	E	R	V	E	P	G	M	I	H	R	A	H	K	G	V	L	F	I	D	E	I	A	T	L	S	L	K	M	Q	Q	S	L	L	T	A	M	Q	E	K	K	F	P	I	T	G	Q	S	E	M	S	S	G	A	M	V	R	T	E	P	V	P	C	D	F	V	L	V	A	A	G	N	L	D	T	V	D
Template Known Secondary structure				G	G	G	G									T	T	T	S					T	T	G	G	G	S															S					B		S		T	T	S	G	G	G	G		B		S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.										.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.								.	220	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																.	.															.	.	.			.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.																.	.															.	.	.			.	.	.	.	.	.	.
Query Sequence		S	L	T	S	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	.	.	.	.	.	.	.	.	.	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	.	.	E	M	S	D	D	G	A	L	E	V	A	R	R	A	.	.	.	R	G	.	.	.	.	.	.	.	T	P	R	I	A	N
Query Conservation																								.	.	.	.	.	.	.	.	.																.	.															.	.	.			.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																.	.															.	.	.			.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	H	P	A	L	R	S	R	I	R	G	Y	G	Y	E	V	Y	M	R	T	T	M	P	D	T	I	E	N	R	R	K	L	V	Q	F	V	A	Q	E	V	K	R	D	G	K	I	P	H	F	T	K	E	A	V	E	E	I	V	R	E	A	Q	K	R	A	G	R	K	G	H	L	T	L	R	L	R	D	L	G
Template Known Secondary structure			S												S							S																									S	S			B	B														T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	R	R	V	R	D	F	A	E	V	K	H	D	G	T	I	S	A	D	I	A	A	Q	A	L	D	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	V	R	A	A	G	D	I	A	V	K	K	G	K	K	Y	V	E	R	E	D	V	I	E	A	V	K	M
Template Known Secondary structure														T	T		S	S	B
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions