Job Description P0A812 Confidence 99.84% Date Thu Jan 5 11:06:35 GMT 2012 Rank 58 Aligned Residues 225 % Identity 20% Template c3hteC_ PDB info PDB header:motor protein Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: crystal structure of nucleotide-free hexameric clpx Resolution 4.03 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	P	E	D	V	A	D	R	A	I	R	P	K	L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	.	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	L	R	T	T	S	G	P	V	L	E
Query Conservation																																									.
Alig confidence												.	.	.																											.
Template Conservation												.	.	.
Template Sequence		L	P	T	P	H	E	I	R	N	H	.	.	.	L	D	D	Y	V	I	G	Q	E	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	D	V	P	F	T	M	A	D	A	T	T	L	E
Template Known Secondary structure												.	.	.			T	T	S		S																																T	T	S	S											T	T	T								G	G	G
Template Predicted Secondary structure												.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		93	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																		.	.														.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.																		.	.														.	.	.	.	.
Query Sequence		K	A	G	D	L	A	A	M	L	T	N	.	.	.	.	.	.	.	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	.	.	V	V	E	E	V	L	Y	P	A	M	E	D	Y	.	.	.	.	.	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I
Query Conservation													.	.	.	.	.	.	.																		.	.														.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																		.	.														.	.	.	.	.
Template Conservation
Template Sequence		D	V	E	N	I	I	Q	K	L	L	Q	K	C	D	Y	D	V	Q	K	A	Q	R	G	I	V	Y	I	D	Q	I	D	K	I	S	R	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D	K	V	I	S	H	R	V	S	E	G	E	L	L
Template Known Secondary structure		T	T	T									T	T	T	T							T								G	G	G	G																			T	T	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		159	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.														200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.
Predicted Secondary structure									.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence									.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		G	A	T	T	R	A	G	.	.	.	.	S	L	T	S	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	L	E	M	S	D	D	G	A	L	E	V	A	R	R	A	.	.	.	R	G
Query Conservation									.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence									.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		A	Q	V	E	P	E	D	L	I	K	F	G	L	I	P	E	F	I	G	R	L	P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	E	F	R	D	E	A	L	D	A	I	A	K	K	A	M	A	R	K	T
Template Known Secondary structure			T										T							T	T									S												S	S	T	T													T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	R	I	A	N	R	L	L	R	R	V	R	D	F	A	E	V	K	H	D	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	R	G	L	R	S	I	V	E	A	A	L	L	D	T	M	Y	D	L	P	S	M
Template Known Secondary structure		T	T																	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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