Job Description P0A812 Confidence 98.60% Date Thu Jan 5 11:06:35 GMT 2012 Rank 107 Aligned Residues 92 % Identity 16% Template c3co5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative two-component system transcriptional response PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae Resolution 2.40 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M	L	T	N	L	E	P	H	D	V	L	F	I	D
Query Conservation
Alig confidence																							.	.	.																				.	.	.
Template Conservation																							.	.	.																				.	.	.
Template Sequence		N	S	A	A	I	Q	E	X	N	R	E	V	E	A	A	A	K	R	T	S	P	.	.	.	V	F	L	T	G	E	A	G	S	P	F	E	T	V	A	R	Y	F	H	.	.	.	K	N	G	T	P	W	V	S	P	A	R	V	E	Y	L	I	D	X	P	X	E	L	L	Q	K	A	E	G	G	V	L	Y	V	G
Template Known Secondary structure																		T		S	S		.	.	.							T	T									T	T		.	.	.		T	T	S						S	S	T	T													T	T	T	S
Template Predicted Secondary structure																							.	.	.																				.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	A	Q	Y	S	R	N	I	Q	T	G	I	T	F	I	I	G
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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