Job Description P0A812 Confidence 99.57% Date Thu Jan 5 11:06:35 GMT 2012 Rank 88 Aligned Residues 283 % Identity 12% Template c2qenA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:walker-type atpase; PDBTitle: the walker-type atpase paby2304 of pyrococcus abyssi Resolution 2.25 Å

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		24	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		R	P	K	L	.	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M	L	T
Query Conservation						.
Alig confidence						.																						.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		R	P	K	T	R	R	E	D	I	F	D	R	E	E	E	S	R	K	L	E	E	S	L	E	N	Y	.	.	.	.	.	.	.	P	L	T	L	L	L	G	I	R	R	V	G	K	S	S	L	L	R	A	F	L	N	E	R	P	G	I	L	I	D	C	R	E	L	Y	A	E	R	G	H	I	T	R	E	E	L	I
Template Known Secondary structure		S				S	G	G	G	S		S																.	.	.	.	.	.	.	S								T	T	S	S												S	S												T	T	T		B
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		N	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T	S	P	L	R	D	R	F	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	L	Q	S	T	I	S	P	F	Q	K	F	Q	S	K	F	K	I	S	L	N	L	K	F	L	T	L	E	P	R	K	L	S	L	R	E	V	F	R	E	L	N	D	L	G	E	E	L	G	E	F	I	V	A	F	D	E	A	Q	Y	L	R	F	Y	G	S	R	G	G	K	E	L	L	A	L	F	A	Y	A
Template Known Secondary structure								S		S									T						G	G	G	T	S		G	G	G																		S								T	G	G	G	G	G	G	B	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
																																						176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	E	M	S	D	D	G	A	L	E	V	A	R	R	A	R	G	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	S	L	P	N	L	K	I	I	L	T	G	S	E	V	G	L	L	H	D	F	L	K	I	T	D	Y	E	S	P	L	Y	G	R	I	A	G	E	V	L	V	K	P	F	D	K	D	T	S	V	E	F	L	K	R	G	F	R	E	V	N	L	D	V	P	E	N	E	I	E	E	A	V	E	L	L	D	G	I
Template Known Secondary structure						T	T								S	S										T	T		T	T	S	T	T	T	T																										T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	I	A	N	R	L	L	R	R	V	R	D	F	A	E	V	K	H	D	G	T	I	S	A	D	I	A	A	Q	A	L	D	M	L	N	V	D	A	E	G	F	D	Y	M	D	R	K	L	L	L	A	V	I	D	K	F	F	G	G	P	V	G	L	D	N	L	A	A	A	I	G	E	E	R	E	T	I	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	W	L	V	V	F	G	V	E	Y	L	R	N	G	D	F	G	R	A	M	K	R	T	L	E	V	A	K	G	L	I	M	G	E	L	E	E	L	R	R	R	S	P	R	Y	V	D	I	L	R	A	I	A	L	G	Y	N	R	W	S	L	I	R	D	Y	L	A	V	K	G	T	K	I	P	E	P	R	L	Y
Template Known Secondary structure																																																								T	T			S											T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	P	Y	L	I	Q	Q	G	F	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	L	E	N	L	K	K	M	N	W	I	V	E
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions