Job Description P0A812 Confidence 99.78% Date Thu Jan 5 11:06:35 GMT 2012 Rank 68 Aligned Residues 300 % Identity 15% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		L	P	E	D	V	A	D	R	A	I	R	P	K	L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	.	.	.	.	.	.	G	V	N	L	R	T	T	S
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence														.	.	.																										.																										.	.	.	.	.	.
Template Conservation														.	.	.																										.
Template Sequence		I	N	R	E	Y	L	L	P	D	Y	I	P	.	.	.	D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	R	E	E	K	.	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N
Template Known Secondary structure		S		G	G	G	G	S	S	S				.	.	.	S			T	T											S	S	G	G	G	G	G	T			.										T	T	S	S																T		S	S
Template Predicted Secondary structure														.	.	.																										.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.												.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	V	L	E	K	A	G	D	L	A	A	M	L	T	N	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	.	.	.	.	.	.	.	.	.	.	.	A	R	S	I	K	I	D	L	P	P	F	T
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	Q	I	D	T	P	Y	R	V	L	A	D	L	L	E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	I	N	S	E	V	N	K	I	S
Template Known Secondary structure							S									T	T	T	T	S					S	S	S																T			S								T							S	S		S	T											S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																			.	.														.	.	.
Query SS confidence															.	.	.	.																																			.	.														.	.	.
Query Sequence		L	I	G	A	T	T	R	A	G	S	L	T	S	.	.	.	.	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	E	.	.	M	S	D	D	G	A	L	E	V	A	R	R	A	.	.	.	R	G	T	P	R	I	A	N	R	L	L
Query Conservation															.	.	.	.																																			.	.														.	.	.
Alig confidence															.	.	.	.																																			.	.														.	.	.
Template Conservation
Template Sequence		F	I	G	I	T	N	D	V	K	F	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	E	E	L	E	D	I	L	T	K	R	A	Q	M	A	F	K	P	G	V	L	P	D	N	V	I	K	L	C	A	A	L	A	A	R	E	H	G	D	A	R	R	A	L	D	L	L
Template Known Secondary structure							S		G	G	G	G	G	G		T	T					T	T	T	T																									B		S	S		S															T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290								.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		R	R	V	R	D	F	A	E	V	K	H	D	G	T	I	S	A	D	I	A	A	Q	A	L	D	M	L	N	V	D	A	E	.	.	.	.	.	G	F	D	Y	M	D	R	K	L	L	L	A	V	I	D	K	F	F	G	G	P	V	G	L	D	N	L	A	A	A	I	.	.	.	.	.	.	.	G	E	E	R	E
Query Conservation																																		.	.	.	.	.																																.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	S	G	E	I	A	E	R	M	K	D	T	K	V	K	E	E	Y	V	Y	M	A	K	E	E	I	E	R	D	R	V	R	D	I	I	L	T	L	P	F	H	S	K	L	V	L	M	A	V	V	S	I	S	V	S	T	T	G	A	V	Y	E	T	Y	L	N	I	C	K	K	L	G	V	E	A	V	T	Q	R
Template Known Secondary structure											T	T		S	S																								T	S																																		T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	E	D	V	L	E	P	Y	L	I	Q	Q	G	F	L	Q	R	T	P	R	G	R
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		R	V	S	D	I	I	N	E	.	L	D	M	V	G	I	L	T	A	K	V	V	N	R
Template Known Secondary structure										.					T	S
Template Predicted Secondary structure										.
Template SS confidence
		342	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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