Job Description P0A812 Confidence 99.12% Date Thu Jan 5 11:06:35 GMT 2012 Rank 102 Aligned Residues 130 % Identity 14% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M	L	T	N	L	E	P
Query Conservation
Alig confidence													.	.	.	.	.	.	.																																																				.	.	.	.
Template Conservation													.	.	.	.	.	.	.																																																				.	.	.	.
Template Sequence		S	F	D	K	F	L	G	T	E	N	A	.	.	.	.	.	.	.	E	L	V	Y	V	L	R	H	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	E	A	G	K	N	A	A	Y	I	D	A	A	S	M	P	.	.	.	.	L	T	D	A	A	F	E
Template Known Secondary structure								S			T		.	.	.	.	.	.	.												S						S	S	S	T	T	T	T													T	T	T								T	T	T	S		.	.	.	.			G	G	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.																																																				.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.			.	.	.	.	180	.
Predicted Secondary structure																																																														.	.	.										.	.
Query SS confidence																																																														.	.	.										.	.
Query Sequence		H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	.	.	.	L	T	S	P	L	R	D	R	F	.	.	G	I	V	Q	R	L
Query Conservation																																																														.	.	.										.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	Y	L	A	V	D	Q	V	E	K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	Q	Q	L	V	I	R	E	D	L	R	T	R	M	A	Y	C	L	V	Y	E	V
Template Known Secondary structure			S						S	T	T				S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T									S	S		T	T	T	S	S									G	G	G	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		182	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		148	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions