Job Description P0A812 Confidence 98.32% Date Thu Jan 5 11:06:35 GMT 2012 Rank 119 Aligned Residues 137 % Identity 14% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M	L	T	N	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L
Query Conservation
Alig confidence																																												.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		I	T	F	I	N	A	L	K	L	W	L	K	G	I	P	K	K	N	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	G	.	.	.	.	.	.	G	S	V	L	S	F	A	N	H	K	S	H	F	W	L	A	S	L	A	D	T	R	A	A	L	V	D	D	A	T	H	A
Template Known Secondary structure													T	T		T	T									S	S	S	S	S												T	T	.	.	.	.	.	.						T	T	S		T	T	S		T	T	S	G	G	G	T		S						S
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.							.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T	S	P	L	R	D	R	F	G	I	.	V	Q	R	L	E	F	Y
Query Conservation																																																													.
Alig confidence																		.	.	.																																									.
Template Conservation																		.	.	.
Template Sequence		C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	.	.	.	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q	A	E	D	R	Y	L	Y	L	H	S	R	V	Q	T	F	R	F	E	Q	P
Template Known Secondary structure									T	T						S	S	.	.	.							S	S	S															S	S		T	T	T		S	T	T					T	T								S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.				500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions