Job Description P0A812 Confidence 99.15% Date Thu Jan 5 11:06:35 GMT 2012 Rank 101 Aligned Residues 261 % Identity 12% Template c2a5yB_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:ced-4; PDBTitle: structure of a ced-4/ced-9 complex Resolution 2.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.																		.	.	.	.	.
Query SS confidence																																																								.	.	.	.																		.	.	.	.	.
Query Sequence		P	K	L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	.	.	.	.	M	G	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	.	.	.	.	.
Query Conservation																																																								.	.	.	.																		.	.	.	.	.
Alig confidence																									.	.	.																													.	.	.	.																		.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		P	K	Q	M	T	C	Y	I	R	E	Y	H	V	D	R	V	I	K	K	L	D	E	M	.	.	.	C	D	L	D	S	F	F	L	F	L	H	G	R	A	G	S	G	K	S	V	I	A	S	Q	A	L	S	K	S	D	Q	L	I	G	I	N	Y	D	S	I	V	W	L	K	D	S	G	T	A	P	K	S	T	F
Template Known Secondary structure							S																		.	.	.	T	T	S	S	S								S	T	T	S	S													S	S	T	B	T	T	T	B	S											S	T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
						96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	D	L	A	A	M	L	T	N	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T	S	P	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		D	L	F	T	D	I	L	L	M	L	K	S	E	D	D	L	L	N	F	P	S	V	E	H	V	T	S	V	V	L	K	R	M	I	C	N	A	L	I	D	R	P	N	T	L	F	V	F	D	D	V	V	Q	E	E	T	I	R	W	A	Q	E	L	R	L	R	C	L	V	T	T	R	D	V	E	I	S	N	A	A
Template Known Secondary structure												T	T	T	S			T	T					T	T															T	T	S	T	T																				T	T								S	B	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	E	M	S	D	D	G	A	L	E	V	A	R	R	A	R	G	T	P	R	I	A	N	R	L	L	R	R	V	R	D	F	A	E	V	K	H	D	G	T	I	S	A	D	I	A	A	Q	A	L
Query Conservation
Alig confidence				.																								.																							.	.	.	.
Template Conservation				.																								.																							.	.	.	.
Template Sequence		S	Q	.	T	C	E	F	I	E	V	T	S	L	E	I	D	E	C	Y	D	F	L	E	A	Y	G	.	M	P	M	P	E	K	E	E	D	V	L	N	K	T	I	E	L	S	S	G	N	P	.	.	.	.	A	T	L	M	M	F	F	K	S	C	E	P	K	T	F	E	K	M	A	Q	L	N	N	K	L	E	S
Template Known Secondary structure			S	.																						T	S	.																			T	T			.	.	.	.								T	T			S	S	S
Template Predicted Secondary structure				.																								.																							.	.	.	.
Template SS confidence
		282	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	L	N	V	D	A	E	G	F	D	Y	M	D	R	K	L	L	L	A	V	I	D	K	F	F	G	G	P	V	G	L	D	N	L	A	A	A	I	G	E	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	L	V	G	V	E	C	I	T	P	Y	S	Y	K	S	L	A	M	A	L	Q	R	C	V	E	V	L	S	D	E	D	R	S	A	L	A	F	A	V	V	M	P
Template Known Secondary structure				S	S	T	T				S	S	S	S	S	S	S											T	S								T	T	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions