Return to main results Retrieve Phyre Job Id

Job DescriptionP0A812
Confidence97.11%DateThu Jan 5 11:06:35 GMT 2012
Rank287Aligned Residues35
% Identity23%Templatec1yj5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80....
Predicted Secondary structure 














Query SS confidence 


































Query Sequence  LRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLR
Query Conservation          


 










  

  
     
Alig confidence 


































Template Conservation        






 






 
           
Template Sequence  LLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHV
Template Known Secondary structure  SS
SS



TTSSTGGGT
Template Predicted Secondary structure 














Template SS confidence 


































   359360.........370.........380.........390...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions