Job Description P0A812 Confidence 99.96% Date Thu Jan 5 11:06:35 GMT 2012 Rank 10 Aligned Residues 206 % Identity 26% Template c1xxhB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii subunit gamma; PDBTitle: atpgs bound e. coli clamp loader complex Resolution 3.45 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	R	A	I	R	P	K	L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	.	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.				.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		L	A	R	K	W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	.	.	.	.	.	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R
Template Known Secondary structure						T			S	S	G	G	G			S														T	T		.	.	.	.	.			S							S	T	T	S	S													S		T	T		S		S	S			S		S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
										82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M	L	T	N	L	.	.	.	.	.	.	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S
Query Conservation		.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T			T	T						S	S		S	T	T	T	T								T				S		S	S	S	S								T	G	G	G															S			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T	S	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	E	M	S	D	D	G	A	L	E	V	A	R	R	A	R	G	T	P	R	I	A	N	R	L	L
Query Conservation
Alig confidence		.	.	.	.	.																						.
Template Conservation		.	.	.	.	.																						.
Template Sequence		.	.	.	.	.	E	H	V	K	F	L	L	A	T	T	D	P	Q	K	L	P	V	T	I	L	S	.	R	C	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	H	I	A	H	E	P	R	A	L	Q	L	L	A	R	A	A	E	G	S	L	R	D	A	L	S	L	T
Template Known Secondary structure		.	.	.	.	.	T	T								S		T	T	S	S							.	T	S																							T	T	T			B												S		S
Template Predicted Secondary structure		.	.	.	.	.																						.
Template SS confidence
							148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	V	R	D	F	A	E	V	K	H	D	G	T	I	S	A	D	I	A	A	Q	A	L	D
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		D	.	.	.	.	Q	A	I	A	S	G	D	G	Q	V	S	T	Q	A	V	S	A	M	L	G
Template Known Secondary structure			.	.	.	.							T	T		B									S
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		222					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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