Job Description P0A812 Confidence 99.72% Date Thu Jan 5 11:06:35 GMT 2012 Rank 75 Aligned Residues 262 % Identity 16% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80	.	.
Predicted Secondary structure																																											.	.	.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		E	D	V	A	D	R	A	I	R	P	K	L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	.	.	.	.	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	.	.	.	.	.	.	.	.	.	G	V	N
Query Conservation																																											.	.	.	.																								.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																										.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		R	R	V	F	D	E	N	Y	I	P	P	E	L	.	.	.	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T	V	K
Template Known Secondary structure		G	G	G	G	S	T	T				S	S		.	.	.	S	S	S	S																	T													T	T			S	S	S																			T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	M	L	T	N	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	Y	V	N	A	F	N	A	P	N	L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H
Template Known Secondary structure							G	G	G			S													T						T	T																		T									S	T					S		T	T	S										T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
									151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																				.	.	.	.	.	.																																			.	.
Query SS confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.																																			.	.
Query Sequence		.	.	.	.	.	.	.	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T	S	.	.	.	.	.	.	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	E	.	.	M	S	D	D	G	A	L	E	V	A	R	R
Query Conservation		.	.	.	.	.	.	.																				.	.	.	.	.	.																																			.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		E	E	I	P	S	R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	G	F	K	L	H	L	P	A	Y	K	S	R	E	L	Y	T	I	L	E	Q	R	A	E	L	G	L	R	D	T	V	W	E	P	R	H	L	E	L	I	S	D	V
Template Known Secondary structure				S			T	T	S													T															T	T		S																									B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		216							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure			.	.	.	.	.	.																																													.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.																																													.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	R	G	T	P	R	I	A	N	R	L	L	R	R	V	R	D	F	A	E	V	K	H	D	G	T	I	S	A	D	I	A	A	Q	A	L	D	M	L	N	V	D	A	E	G	.	.	.	.	.	.	F	D	Y	M	D	R	K	L	L	L	A	V	I	D	K	F	F	G	G	P
Query Conservation			.	.	.	.	.	.																																													.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																																													.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	E	D	K	G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A	E	A	M	G	R	D	S	L	S	E	D	L	V	R	K	A	V	S	E	N	E	A	A	S	I	Q	T	H	E	L	E	A	L	S	I	H	E	L	I	I	L	R	L	I	A	E	A	T	L	G	G	M
Template Known Secondary structure				G	G	G	T	S																			G	G	G	T		S	S																										S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions