Job Description P0A812 Confidence 99.87% Date Thu Jan 5 11:06:35 GMT 2012 Rank 48 Aligned Residues 202 % Identity 19% Template c1qvrB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb Resolution 3.00 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																														.	.	.																				.	.
Query SS confidence																									.	.	.	.																														.	.	.																				.	.
Query Sequence		E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	.	.	.	.	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	.	.	.	V	N	L	R	T	T	S	G	P	V	L	E	K	A	G	D	L	A	A	.	.
Query Conservation																									.	.	.	.																														.	.	.																				.	.
Alig confidence																									.	.	.	.																														.	.	.																				.	.
Template Conservation
Template Sequence		K	R	V	V	G	Q	D	E	A	I	R	A	V	A	D	A	I	R	R	A	R	A	G	L	K	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	A	K	T	L	A	A	T	L	F	D	T	E	E	A	M	I	R	I	D	M	T	E	Y	M	E	K	H	A	V	S	R	L	Q
Template Known Secondary structure		T	T	S		S																G	G	G	T	S		S	S	S		S						B	S	S	S	S	S	S														S	S	G	G	G						T	T	T			S	S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	M	L	T	N	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																								.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		L	T	E	A	V	R	R	R	P	Y	S	V	I	L	F	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	I	L	D	D	G	R	L	T	D	S	.	.	.	.	.	.	.	H	G	R	T	V	D	F	R	N	T	V	I	I	L	T	S	N	L	G	S	P	L	I	L	E	G	L	Q	K	G	W	P
Template Known Secondary structure										S	S						S	S	G	G	G	S													T	T	T					S	.	.	.	.	.	.	.	S	S						T	T									T	T										T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.								.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
														164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200										.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	G	S	L	T	S	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	.	.	.	.	.	.	.	.	.	G	L	E	M	S	D	D	G	A	L	E	V	A	R	R	A	.	.	.	R	G	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		Y	E	R	I	R	D	E	V	F	K	V	L	Q	Q	H	F	R	P	E	F	L	N	R	L	D	E	I	V	V	F	R	P	L	T	K	E	Q	I	R	Q	I	V	E	I	Q	L	S	Y	L	R	A	R	L	A	E	K	R	I	S	L	E	L	T	E	A	A	K	D	F	L	A	E	R	G	Y	D	P	V	F	G
Template Known Secondary structure														T	T	T	S							T		S	B			B																										T	T	T																			B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	I	A	N	R	L	L	R	R	V	R	D	F	A	E	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	P	L	R	R	V	I	Q	R	E	L	E	T	P	L	A	Q
Template Known Secondary structure		T	S										T
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions