Job Description P0A812 Confidence 99.94% Date Thu Jan 5 11:06:35 GMT 2012 Rank 21 Aligned Residues 186 % Identity 24% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		A	I	R	P	K	L	L	E	E	Y	V	G	Q	P	Q	V	R	S	Q	M	E	I	F	I	K	A	A	K	L	R	G	D	A	L	D	H	L	L	I	F	G	P	P	G	L	G	K	T	T	L	A	N	I	V	A	N	E	M	G	V	N	.	.	.	.	.	L	R	T	T	S	G	P	V	L	E	K	A	G	D
Query Conservation																																																															.	.	.	.	.
Alig confidence																													.	.	.	.	.																														.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		K	Y	R	P	Q	R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	.	.	.	.	.	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V
Template Known Secondary structure		T	S				S	G	G	G			S													T	T	T	.	.	.	.	.									S		T	T	S	S	T	T												G	G	G										T	T	T	S	S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		97	.	.	100	.	.	.									.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		L	A	A	M	L	T	N	.	.	.	.	.	.	.	.	L	E	P	H	D	V	L	F	I	D	E	I	H	R	L	S	P	V	V	E	E	V	L	Y	P	A	M	E	D	Y	Q	L	D	I	M	I	G	E	G	P	A	A	R	S	I	K	I	D	L	P	P	F	T	L	I	G	A	T	T	R	A	G	S	L	T
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	E	K	V	K	E	F	A	R	T	K	P	I	G	G	A	S	F	K	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	N	V	R	F	I	L	S	C	N	Y	S	S	K	I
Template Known Secondary structure										T	T	S			S	S	S		S								T	G	G	G	S															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								S		G	G	G	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	R	D	R	F	G	I	V	Q	R	L	E	F	Y	Q	V	P	D	L	Q	Y	I	V	S	R	S	A	R	F	M	G	L	E	M	S	D	D	G	A	L	E	V	A	R	R	A	R	G	T	P	R	I	A	N	R	L	L	R	R	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	L	E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	E	G	D	M	R	R	A	I	N	I	L	Q	A	A	A
Template Known Secondary structure							T	T																										T																T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions