 |
Job Description | P0AFR9 | Confidence | 1.97% | Date | Thu Jan 5 11:27:06 GMT 2012 |
Rank | 47 | Aligned Residues | 25 |
% Identity | 12% | Template | d1jhfa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| LexA repressor, N-terminal DNA-binding domain
|
Resolution | 1.80 |
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
. | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | T | S | W | S | L | V | E | A | S | M | D | L | G | A | . |
N | G | W | Q | T | F | R | Y | V |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|
|
|   |   |   |
|
| . |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
Template Sequence |   |
T | G | M | P | P | T | R | A | E | I | A | Q | R | L | G | F | R | S | P | N | A | A | E | E | H | L |
Template Known Secondary structure |   |
 | S | S |
|
|
|  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|