 |
Job Description | P0ACU5 | Confidence | 53.22% | Date | Thu Jan 5 11:19:04 GMT 2012 |
Rank | 354 | Aligned Residues | 32 |
% Identity | 16% | Template | d1y0ua_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ArsR-like transcriptional regulators
|
Resolution | 1.60 |
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | R | S | L | V | E | A | A | F | S | Q | L | S | A | E | R | S | F | A | S | L | S | L | R | E | V | A | R | E | A | G | I | A | P | T | S | F | Y | R | H |
Query Conservation |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
| . |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
| . | . | . | . | . |   |
|   |
| . |   | . | . | . |
|
|   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |
|
|
Template Sequence |   |
V | R | R | K | I | L | R | . |
. |
. |
. |
. |
X | L | D | K | . |
G | . |
. |
. |
R | S | E | E | E | I | X | Q | T | L | S | L | S | K | K | Q | L | D | Y | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . |  |  |  | T | . | T | . | . | . |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . |  |  |
|
| . |
| . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 40 | |
. | |
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|