Job Description P0ACU5 Confidence 99.84% Date Thu Jan 5 11:19:04 GMT 2012 Rank 99 Aligned Residues 179 % Identity 11% Template c3cdlA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator aefr; PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000 Resolution 2.36 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	G	S	V
Query Conservation
Alig confidence																		.																																															.	.	.	.
Template Conservation																		.																																															.	.	.	.
Template Sequence		T	D	Q	K	R	E	S	I	V	Q	A	A	I	A	E	F	.	G	D	R	G	F	E	I	T	S	X	D	R	I	A	A	R	A	E	V	S	K	R	T	V	Y	N	H	F	P	S	K	E	E	L	F	A	E	X	L	Q	R	L	W	N	C	A	.	.	.	.	E	V	V	Y	R	P	L	V	S	L	R	E	Q
Template Known Secondary structure																		.					T	T	T										T	T	S							T	T	S	S	S															T		.	.	.	.			S			T	T	S
Template Predicted Secondary structure																		.																																															.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I	V	F	S	A	G	.	.
Query Conservation																																																																																.	.
Alig confidence																									.	.																																																						.	.
Template Conservation																									.	.
Template Sequence		L	L	E	L	L	W	G	K	X	R	N	L	T	D	S	S	F	L	D	L	A	R	V	.	.	V	V	G	A	T	I	H	S	P	E	R	A	Q	V	W	L	E	E	T	F	S	A	W	I	R	A	A	Q	K	D	G	R	L	K	P	V	D	P	G	F	A	A	T	Q	X	H	A	L	L	K	S	F	A	F	W
Template Known Secondary structure														T											.	.							S						T	T																T	T		B		S																			T
Template Predicted Secondary structure																									.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	E	A	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S	K	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		P	Q	V	T	F	N	A	A	L	L	T	P	Q	E	Q	S	N	V	V	E	S	A	L	N	X	F	L	G	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions