Job Description P0ACU5 Confidence 99.82% Date Thu Jan 5 11:19:04 GMT 2012 Rank 112 Aligned Residues 175 % Identity 9% Template c2zcmB_ PDB info PDB header:transcription Chain: B: PDB Molecule:biofilm operon icaabcd hth-type negative transcriptional PDBTitle: crystal structure of icar, a repressor of the tetr family Resolution 1.33 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	G	S	V	I	R	T	S
Query Conservation
Alig confidence														.																																																			.	.	.	.
Template Conservation														.																																																			.	.	.	.
Template Sequence		K	D	K	I	I	D	N	A	I	T	L	F	.	S	E	K	G	Y	D	G	T	T	L	D	D	I	S	K	S	V	N	I	K	K	A	S	L	Y	Y	H	Y	D	N	K	E	E	I	Y	R	K	S	V	E	N	C	F	N	Y	F	I	D	F	X	.	.	.	.	X	R	N	Y	S	I	D	G	L	Y	Q	F	L
Template Known Secondary structure														.					T	T	T										T	T			G	G	G	G	G	G	T		S	S																					.	.	.	.		T
Template Predicted Secondary structure														.																																																			.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I	V	F	S	A	G	A	E	A	L	D	V
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		F	K	F	I	F	D	V	D	E	R	Y	I	K	L	Y	V	Q	L	S	S	A	P	E	A	L	N	S	E	I	K	H	H	L	Q	E	I	N	T	T	L	H	D	E	L	I	K	Y	Y	D	P	T	H	I	A	L	.	D	K	E	D	F	I	N	X	I	L	X	F	L	E	T	W	Y	F	R	A	S	F	S	Q
Template Known Secondary structure								S										G	G	G	G	S		G	G	G																				G	G	G			T	T	T	B	S	S	.
Template Predicted Secondary structure																																																									.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	G	I	I	E	D	S	K	N	R	F	K	D	Q	V	Y	S	L	L	N
Template Known Secondary structure						G	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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