Job Description P0ACU5 Confidence 99.84% Date Thu Jan 5 11:19:04 GMT 2012 Rank 104 Aligned Residues 169 % Identity 9% Template c2yvhA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr Resolution 2.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	G	S	V	I	R	T
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		K	K	E	X	I	L	R	T	A	I	D	Y	I	.	G	E	Y	S	L	E	T	L	S	Y	D	S	L	A	E	A	T	G	L	S	K	S	G	L	I	Y	H	F	P	S	R	H	A	L	L	L	G	X	H	E	L	L	A	D	D	W	D	K	E	L	R	D	I	T	R	D	P	E	D	P	L	E	R	L	R	A
Template Known Secondary structure															.			S		S	T	T											S	S									S	S	S																			T	T	T	S	S		S		T	T	S
Template Predicted Secondary structure															.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I	V	F	S	A	G	A	E	A	L	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	T	L	A	E	N	V	S	R	P	E	L	L	L	L	I	D	A	P	S	H	.	.	.	.	.	.	.	.	.	.	.	P	D	F	L	N	A	W	R	T	V	N	H	Q	W	I	P	D	T	D	D	L	E	N	D	A	H	K	R	A	V	Y	L	V	Q	L	A	A	D	G	L	F	V	H	D	Y	I
Template Known Secondary structure									S												G	G	G		.	.	.	.	.	.	.	.	.	.	.							T					T	T	T	S					S		S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.												.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	D	D	V	L	S	K	S	K	R	Q	A	X	L	E	T	I	L	E	L	I
Template Known Secondary structure		S	S																		T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions