Job Description P0ACU5 Confidence 99.91% Date Thu Jan 5 11:19:04 GMT 2012 Rank 30 Aligned Residues 198 % Identity 14% Template c2rasB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a putative tetr/acrr family transcriptional2 regulator (saro_0558) from novosphingobium aromaticivorans dsm at3 1.80 a resolution Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	K	E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	G
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		T	E	H	D	A	X	R	A	R	L	V	D	V	A	Q	A	I	V	.	E	E	R	G	G	A	G	L	T	L	S	E	L	A	A	R	A	G	I	S	Q	A	N	L	S	R	Y	F	E	T	R	E	D	L	X	E	A	I	A	D	Y	W	F	H	P	X	V	E	I	X	E	D	V	L	A	S	D	L	P	P	R
Template Known Secondary structure																				.					G	G	G											T	S							T	T		S	S												T	T													S
Template Predicted Secondary structure																				.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		S	V	I	R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	.	.	.	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I	V	F
Query Conservation																																																										.	.	.
Alig confidence																																																										.	.	.
Template Conservation
Template Sequence		R	K	X	Y	E	F	F	A	R	R	F	V	V	X	R	R	K	W	E	A	D	P	V	K	L	Q	T	Y	I	E	V	G	N	D	Y	F	E	Q	V	R	S	Y	I	D	L	A	D	H	Y	L	G	E	I	I	G	E	A	X	S	D	G	A	F	S	G	L	E	V	D	E	T	I	S	L	V	N	Q	X	C	A
Template Known Secondary structure																																																														T		S	T	T														S	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	G	A	E	A	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S	K	G	A	Y	Y	W	Y	R	R	E	Q	E	K	T	A	I
Query Conservation
Alig confidence												.																								.	.
Template Conservation												.																								.	.
Template Sequence		P	Y	C	A	L	N	T	X	T	T	.	F	X	E	R	L	S	E	D	K	L	A	R	I	V	D	A	V	F	D	G	L	S	A	.	.	Q	D	R	G	A	R	S	L	T
Template Known Secondary structure		G	G	T								.		G	G	G																		S	S	.	.	S			S	S	S		T	T
Template Predicted Secondary structure												.																								.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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