Job Description P0ACU5 Confidence 99.90% Date Thu Jan 5 11:19:04 GMT 2012 Rank 46 Aligned Residues 188 % Identity 16% Template c2raeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, acrr family protein; PDBTitle: crystal structure of a tetr/acrr family transcriptional regulator from2 rhodococcus sp. rha1 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	V	R	A	Q	Q	K	E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R
Query Conservation
Alig confidence								.	.	.															.																																																						.
Template Conservation								.	.	.															.																																																						.
Template Sequence		I	G	R	R	P	S	.	.	.	T	T	Q	D	R	I	S	T	V	G	I	E	L	F	.	T	E	Q	G	F	D	A	T	S	V	D	E	V	A	E	A	S	G	I	A	R	R	T	L	F	R	Y	F	P	S	K	N	A	I	P	W	G	D	F	D	A	H	L	A	E	M	R	A	Q	L	A	A	Q	.	P	D
Template Known Secondary structure					S			.	.	.															.					T	T	T	S									T	T	S										S	S	T	T	T	G	G	G		S															S	.		T
Template Predicted Secondary structure								.	.	.															.																																																						.
Template SS confidence
		11	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		I	A	K	G	G	S	V	I	R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	.	.	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V
Query Conservation																																																															.	.
Alig confidence																																	.																														.	.
Template Conservation																																	.
Template Sequence		D	I	P	I	V	D	G	L	T	A	A	L	L	Q	F	N	A	F	P	A	S	E	E	I	N	H	R	K	R	M	G	.	L	I	L	R	V	P	A	L	Q	A	Y	S	V	V	M	Y	E	G	W	R	N	V	I	A	E	Y	V	A	S	R	L	G	T	S	P	T	D	H	V	P	R	T	V	G	Y	L	L	L
Template Known Secondary structure		T	S													T	T				G	G	G										.					S																											T	S		T	T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	V	F	S	A	G	A	E	A	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S	K	G	A	Y	Y	W
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		G	V	A	M	S	A	Y	E	Q	W	L	D	D	D	S	L	E	L	N	E	L	L	A	S	G	.	.	.	M	Q	S	L	Y	D	G	L	S	S	L
Template Known Secondary structure															T	T	S										.	.	.								S	T	T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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