Job Description P0ACU5 Confidence 99.89% Date Thu Jan 5 11:19:04 GMT 2012 Rank 62 Aligned Residues 160 % Identity 14% Template c2qwtA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of the tetr transcription regulatory2 protein from mycobacterium vanbaalenii Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Q	Q	K	E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K
Query Conservation
Alig confidence																						.						.																																																				.
Template Conservation																						.						.																																																				.
Template Sequence		L	R	A	D	A	A	R	N	R	A	R	V	L	E	V	A	Y	D	T	F	.	A	A	E	G	L	.	G	V	P	M	D	E	I	A	R	R	A	G	V	G	A	G	T	V	Y	R	H	F	P	T	K	Q	A	L	V	V	A	V	A	E	D	R	V	R	R	I	V	D	H	A	R	T	L	L	A	A	E	.	G
Template Known Secondary structure																						.			T		T	.	T	S									T	T	S										S	S																												.
Template Predicted Secondary structure																						.						.																																																				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	S	V	I	R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I	V	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	E	A	L	F	V	F	M	R	D	M	V	R	S	A	A	A	D	Y	G	L	V	D	A	L	V	G	Y	G	L	D	L	E	V	A	A	P	G	A	E	A	A	F	L	A	T	L	G	E	L	L	A	A	A	Q	R	A	G	T	V	R	A	D	V	D	V	A	V	I	K	A	L	L	V	S	E	R	V	V
Template Known Secondary structure																													T	T	T							S	T	T																			T	T	S	B		S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		164	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		174	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions