Job Description P0ACU5 Confidence 99.90% Date Thu Jan 5 11:19:04 GMT 2012 Rank 45 Aligned Residues 184 % Identity 13% Template c2qtqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a predicted dna-binding transcriptional regulator2 (saro_1072) from novosphingobium aromaticivorans dsm at 1.85 a3 resolution Resolution 1.85 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	.	K	G	G	S	V	I	R
Query Conservation																																																																										.
Alig confidence															.																																																											.
Template Conservation															.
Template Sequence		A	R	D	L	L	L	Q	T	A	S	N	I	X	.	R	E	G	D	V	V	D	I	S	L	S	E	L	S	L	R	S	G	L	N	S	A	L	V	K	Y	Y	F	G	N	K	A	G	L	L	K	A	L	L	D	R	D	X	E	N	I	V	K	S	V	D	A	L	L	A	K	D	D	X	S	P	E	A	K	L	R
Template Known Secondary structure															.				T		S												T											S	S																									S			S	S
Template Predicted Secondary structure															.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	.	.	.	.	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I	V	F	S	A	G
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.
Template Conservation
Template Sequence		R	H	I	S	K	C	I	D	T	Y	Y	D	Y	P	Y	L	N	R	L	L	X	R	L	V	R	D	S	D	E	A	E	A	K	R	I	A	D	Q	Y	L	L	P	L	H	R	A	Y	N	R	F	I	G	E	G	V	K	A	G	V	F	R	P	I	N	P	Q	L	F	Y	F	T	V	T	G	A	A	D	R	F	F
Template Known Secondary structure															T	T																									T																	T	T	S	B														T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		166							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	E	A	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S	K	G	A	Y
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	R	L	V	L	K	H	C	F	D	Q	D	T	L	T	E	Q	L	R	D	S	Y	R	E	H	T	V	D	F	I	X	A	G	I	L
Template Known Secondary structure											S			S																							B
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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