Job Description P0ACU5 Confidence 99.90% Date Thu Jan 5 11:19:04 GMT 2012 Rank 48 Aligned Residues 193 % Identity 10% Template c2qcoA_ PDB info PDB header:transcription Chain: A: PDB Molecule:cmer; PDBTitle: crystal structure of the transcriptional regulator cmer from2 campylobacter jejuni Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		V	R	A	Q	Q	K	E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	.	.	R
Query Conservation																																																																															.	.
Alig confidence																							.																																																								.	.
Template Conservation																							.
Template Sequence		T	P	S	Q	K	V	L	A	R	Q	E	K	I	K	A	V	A	L	E	L	F	.	L	T	K	G	Y	Q	E	T	S	L	S	D	I	I	K	L	S	G	G	S	Y	S	N	I	Y	D	G	F	K	S	K	E	G	L	F	F	E	I	L	D	D	I	C	K	K	H	F	H	L	I	Y	S	K	T	Q	E	I	K
Template Known Secondary structure																							.			T	T	T	T	T												T	T		T	T		S	S	S	T	T	S																										T	T	T
Template Predicted Secondary structure																							.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																										.	.																																											.	.
Query SS confidence																										.	.																																											.	.
Query Sequence		I	A	K	G	G	S	V	I	R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	.	.	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	.	.	R	A	F	T	E	A	Q	A	E	A
Query Conservation																										.	.																																											.	.
Alig confidence																										.	.																																											.	.
Template Conservation
Template Sequence		N	G	T	L	K	E	I	L	T	S	F	G	L	A	F	I	E	I	F	N	Q	P	E	A	V	A	F	G	K	I	I	Y	S	Q	V	Y	D	K	D	R	H	L	A	N	W	I	E	N	N	Q	Q	N	F	S	Y	N	I	L	M	G	F	F	K	Q	Q	N	N	S	Y	M	K	K	N	A	E	K	L	A	V	L
Template Known Secondary structure		T	S																		T	S													G	G	G		S	S										S	T	T	S	S	T										S	S	S							T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		M	V	T	I	V	F	S	A	G	A	E	A	.	.	.	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S	K	G	A	Y	Y
Query Conservation														.	.	.
Alig confidence														.	.	.
Template Conservation
Template Sequence		F	C	T	M	L	K	E	P	Y	H	H	L	N	V	L	I	N	A	P	L	K	N	K	K	E	Q	K	E	H	V	E	F	V	V	N	V	F	L	N	G	I	N	S
Template Known Secondary structure								T	T																															T		S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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