Job Description P0ACU5 Confidence 99.86% Date Thu Jan 5 11:19:04 GMT 2012 Rank 85 Aligned Residues 187 % Identity 14% Template c2oi8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative regulatory protein sco4313; PDBTitle: crystal structure of putative regulatory protein sco4313 Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Q	Q	K	E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		R	E	R	Y	R	T	Q	V	R	A	E	I	K	D	H	A	W	E	Q	I	.	A	T	A	G	A	S	A	L	S	L	N	A	I	A	K	R	X	G	X	S	G	P	A	L	Y	R	Y	F	D	G	R	D	E	L	I	T	E	L	I	R	D	A	Y	R	S	Q	A	D	S	L	R	A	A	A	A	S	G	A	D
Template Known Secondary structure		S	S																			.					T	T	S										T	T								T	T		S	S																										T	T
Template Predicted Secondary structure																						.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130												.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	S	V	I	R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	.	.	.	.	.	.	.	.	.	.	.	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	G	L	A	H	A	L	R	A	W	A	L	D	D	P	Q	R	Y	F	L	I	F	G	T	P	V	P	G	Y	R	A	P	D	D	I	T	E	I	A	A	E	T	X	A	V	I	V	D	A	C	A	A	G	T	D	G	A	F	D	A	H	L	D	T	H	R	Q	W	A	D	R	P	A	P	S	S	A	L	H
Template Known Secondary structure																									S	S			T	T					G	G	G	T	T	T	T																	S									S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		Q	A	E	A	M	V	T	I	V	F	S	A	G	A	E	A	L	D	V	G	.	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		R	A	L	S	F	W	S	R	L	H	G	V	L	S	L	E	L	A	G	Q	F	T	G	X	G	F	D	S	A	L	L	F	E	A	E	L	K	D	L	L
Template Known Secondary structure																			T	T	T	T	T	T	S		S														S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions