Job Description P0ACU5 Confidence 99.79% Date Thu Jan 5 11:19:04 GMT 2012 Rank 115 Aligned Residues 184 % Identity 16% Template c2g7gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rha04620, putative transcriptional regulator; PDBTitle: the crystal structure of the putative transcriptional regulator2 rha04620 from rhodococcus sp. rha1 Resolution 2.01 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	G	S	V	I	R	T
Query Conservation
Alig confidence															.					.	.																																									.	.	.	.
Template Conservation															.					.	.																																									.	.	.	.
Template Sequence		D	R	E	R	I	A	E	A	A	L	E	L	V	.	D	R	D	G	.	.	D	F	R	X	P	D	L	A	R	H	L	N	V	Q	V	S	S	I	Y	H	H	A	K	G	R	A	A	V	V	E	L	V	R	H	R	V	V	R	E	I	.	.	.	.	D	G	S	A	F	E	R	L	P	W	D	E	A	F	S	E
Template Known Secondary structure															.				S	.	.	S										T	T	S							T	T	S																T	T		.	.	.	.			G	G	G	G	T	S
Template Predicted Secondary structure															.					.	.																																									.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.													.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	.	.	.	.	.	.	.	.	.	.	.	.	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		W	A	R	S	Y	R	A	A	F	S	R	H	P	T	A	I	R	L	L	A	T	.	E	T	V	R	D	P	G	S	L	S	V	Y	H	S	A	A	A	G	L	R	G	A	G	F	P	D	D	H	I	X	A	V	I	T	A	A	E	N	F	L	L	G	A	A	L	D	A	A	A	P	E	V	X	I	E	A	D	S
Template Known Secondary structure												T		G	G	G						T	.	S																						T																										S		S
Template Predicted Secondary structure																							.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	V	F	S	A	G	A	E	A	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S	K	G	A	Y	Y	W	Y	R	R	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	T	D	D	A	L	T	R	A	L	A	A	A	P	R	G	P	E	R	A	E	Q	A	F	E	L	G	L	A	A	L	L	A	G	F	H	H	L	L	Q	E	C	G
Template Known Secondary structure		S		S	S	S									S			T	T																									T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions