Job Description P0ACU5 Confidence 99.85% Date Thu Jan 5 11:19:04 GMT 2012 Rank 96 Aligned Residues 172 % Identity 20% Template c2fd5A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: the crystal structure of a transcriptional regulator from pseudomonas2 aeruginosa pao1 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	K	E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	G
Query Conservation
Alig confidence																				.																																																				.
Template Conservation																				.																																																				.
Template Sequence		D	K	K	T	Q	T	R	A	R	I	L	G	A	A	T	Q	A	L	.	L	E	R	G	A	V	E	P	S	V	G	E	V	M	G	A	A	G	L	T	V	G	G	F	Y	A	H	F	Q	S	K	D	A	L	M	L	E	A	F	E	Q	L	L	G	K	R	R	E	L	L	G	.	E	L	D	P	G	L	S	G	K
Template Known Secondary structure																				.				T	T	T	S										T	T			G	G	G	G	G	G	T		S																							.	T	S		T	T	S
Template Predicted Secondary structure																				.																																																				.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		S	V	I	R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	.	.	.	.	.	N	A	F	R	L	L	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.
Template Sequence		E	R	R	A	L	A	A	A	F	Y	L	S	R	K	H	R	D	A	Q	V	D	A	G	C	P	L	P	A	T	L	A	E	V	A	R	L	P	E	G	F	R	E	V	L	S	R	H	V	E	I	M	V	T	S	L	.	.	.	.	.	.	.	.	A	E	S	P	E	E	T	D	V	A	L	A	D	L	V	L	M
Template Known Secondary structure												S						T	T		S	S	S			S					G	G	G	G	G	G	S																				.	.	.	.	.	.	.	.		S	S	G	G	G
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	S	A	G	A	E	A	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	G	L	A	L	A	R	A	L	G	P	G	E	L	S	D	R	V	L	R	A	A	K	Q	A	V
Template Known Secondary structure													S	S													T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions