Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACU5
Confidence34.52%DateThu Jan 5 11:19:04 GMT 2012
Rank433Aligned Residues40
% Identity10%Templatec2da7A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:zinc finger homeobox protein 1b; PDBTitle: solution structure of the homeobox domain of zinc finger2 homeobox protein 1b (smad interacting protein 1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.....
Predicted Secondary structure 















Query SS confidence 







































Query Sequence  VEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDV
Query Conservation 
 

  
   
 
    

  

  



  


  
 

Alig confidence 







































Template Conservation 
  

  
  
  

      

  
 
    
  

 

Template Sequence  MSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQR
Template Known Secondary structure 
SS

T

Template Predicted Secondary structure 







Template SS confidence 







































   17..20.........30.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions