Job Description P0ACU5 Confidence 99.86% Date Thu Jan 5 11:19:04 GMT 2012 Rank 86 Aligned Residues 175 % Identity 18% Template c2d6yA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:putative tetr family regulatory protein; PDBTitle: crystal structure of transcriptional factor sco4008 from streptomyces2 coelicolor a3(2) Resolution 2.30 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	R	R	S	L	V	E	A	A	F	S	Q	L	S	A	E	R	S	F	A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	G	S	V	I
Query Conservation
Alig confidence																	.																																																				.	.	.	.	.	.	.
Template Conservation																	.																																																				.	.	.	.	.	.	.
Template Sequence		E	A	T	K	A	R	I	F	E	A	A	V	A	E	F	.	A	R	H	G	I	A	G	A	R	I	D	R	I	A	A	E	A	R	A	N	K	Q	L	I	Y	A	Y	Y	G	N	K	G	E	L	F	A	S	V	L	E	K	K	X	L	D	L	A	I	S	V	P	.	.	.	.	.	.	.	V	D	P	D	D	I
Template Known Secondary structure																	.				T	T	T	S											T											S	S																				S		.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																	.																																																				.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		R	T	S	V	S	T	F	M	E	F	I	G	N	N	P	N	A	F	R	L	L	.	.	.	L	R	E	R	S	G	T	S	A	A	F	R	A	A	V	A	R	E	I	Q	H	F	I	A	E	L	A	D	Y	L	E	L	E	N	H	M	P	R	A	F	T	E	A	Q	A	E	A	M	V	T	I	V	F	S	A	G
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		E	G	W	I	D	R	L	L	D	Y	H	A	A	H	P	E	L	L	R	L	L	F	W	E	G	X	E	Y	G	T	A	E	L	P	H	E	A	E	R	Q	E	H	Y	A	R	K	V	A	A	V	R	D	G	Q	E	R	G	V	I	T	D	A	I	P	A	P	D	L	L	F	L	L	V	A	X	A	N	W	A	V
Template Known Secondary structure																T														T	T	S			T	T																					T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		A	E	.	.	.	.	.	.	A	L	D	V	G	V	E	Q	R	R	Q	L	E	E	R	L	V	L	Q	L	R	M	I	S
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	P	Q	X	K	R	I	L	V	G	G	G	D	A	G	T	D	G	L	R	D	S	I	K	K	A	A	R	R	I	V
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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