Job Description P0ACU5 Confidence 31.58% Date Thu Jan 5 11:19:04 GMT 2012 Rank 455 Aligned Residues 70 % Identity 20% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		A	S	L	S	L	R	E	V	A	R	E	A	G	I	A	P	T	S	F	Y	R	H	F	R	D	V	D	E	L	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	D	E	S	G	L	M	L	R	Q	L	M	R	Q	A	R	Q	R	I	A	K	G	.	G	S	V	I	R	T	S
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L	L	I	A	W	F	Q	Q	I	R	A	A	G	L	P	V	K	G	I	I	L	K	E	K
Template Known Secondary structure		T	T	S										T												T												G	G	G	G	G	T								T	T															G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		92	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	T	F	M	E	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	R	I	A	E	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions