Return to main results Retrieve Phyre Job Id

Job DescriptionQ7DFU6
Confidence99.55%DateThu Jan 5 12:37:40 GMT 2012
Rank181Aligned Residues179
% Identity18%Templatec3qmwD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:thioesterase; PDBTitle: redj with peg molecule bound in the active site
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  KPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEF
Query Conservation   
       
 

  

  
        
  

  

 

  
                             
  

   
Alig confidence 

































.


















........
















.
Template Conservation             
   

 

       
   
  .   
   
 

 
 
    ........        
      
 .
Template Sequence  EPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGD. EVAVVPVQLPGRGLRLRER. . . . . . . . PYDTMEPLAEAVADALE.
Template Known Secondary structure 



TTS
S

TT

GGGGTT
S.S


TTSGGGTTS
........


S.
Template Predicted Secondary structure 


















.













........



.
Template SS confidence 















































































   24.....30.........40.........50....... ..60.........70...... ...80.........90...
 
   153......160.........170.........180.........190...
Predicted Secondary structure 

















.......................................
Query SS confidence 








































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  MQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
         
   
 
 

  
   
              .......................................
Alig confidence  ...





































.......................................
Template Conservation  ...         




 

 

   
                                                     
Template Sequence  . . . EHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDTLG
Template Known Secondary structure  ...TTT
SSSTTT



S
S


GGG
SS


TTS
TTS



Template Predicted Secondary structure  ...






























Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170
 
   194.....200.........210.........220.........230.........240.........250.....
Predicted Secondary structure  ..................



































Query SS confidence  . . . . . . . . . . . . . . . . . .





























































Query Sequence  . . . . . . . . . . . . . . . . . . RQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTP
Query Conservation  ..................             
 
   
  
   
         
   
        

  


      
Alig confidence  ..................































..
















.






...
Template Conservation                                 


   
  
         ..                
.

     ...
Template Sequence  AAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVE. . AWRPYTTGSFLRRHLPG. NHFFLNG. . .
Template Known Secondary structure  TS







BSS
TT
STT
..TTGGGBSS
SS.
TTGGGS...
Template Predicted Secondary structure 













..





.






...
Template SS confidence 















































































   173......180.........190.........200.........210.........220.. .......230......... 240......
 
   256...260.........270.......
Predicted Secondary structure 



Query SS confidence 





















Query Sequence  RYDKSAADLAWQRTLKWFDKYL
Query Conservation                  

   
Alig confidence  .......














Template Conservation  ....... 
    

  
   
Template Sequence  . . . . . . . GPSRDRLLAHLGTEL
Template Known Secondary structure  .......S
Template Predicted Secondary structure  .......
Template SS confidence 





















   247..250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions