Return to main results Retrieve Phyre Job Id

Job DescriptionQ7DFU6
Confidence99.93%DateThu Jan 5 12:37:40 GMT 2012
Rank59Aligned Residues217
% Identity17%Templatec3ls2D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:s-formylglutathione hydrolase; PDBTitle: crystal structure of an s-formylglutathione hydrolase from2 pseudoalteromonas haloplanktis tac125
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70...... ...80.........90......... 100.........110.........120
Predicted Secondary structure 








..











...








......
Query SS confidence 
























. .






















. . .




















. . . . . .
Query Sequence  VAEYITYPSPNGHGEVRGYLVKPAK. . MSGKTPAVVVVHENRGLNPYIED. . . VARRVAKAGYIALAPDGLSSV. . . . . .
Query Conservation      
     

   
   
  
  ..     
 

  

  
       ... 
  

  

 

  
     ......
Alig confidence 
























..






















...




















......
Template Conservation          
          

 
         



 


                     
                  
Template Sequence  WHKQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNE
Template Known Secondary structure  TTTT
TT
BTTB


TT

SS

T


SS

STTS


Template Predicted Secondary structure 


































Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   121........130.........140.........150.........160.........170.........180.........190.....
Predicted Secondary structure  .....




























Query SS confidence  . . . . .










































































Query Sequence  . . . . . GGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQ
Query Conservation  .....                        
  

   
         
   
 
 

  
   
                
Alig confidence  .....










































































Template Conservation                               
   
               
 
 
 

  
  

   
  
  
 
 

 
Template Sequence  DSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPI
Template Known Secondary structure  S
TTSBTTB
TTSB

STTTTTT
BTSSBTSTTT
S
S

Template Predicted Secondary structure 





































Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   196...200 .........210.........220. ........230.........240..
Predicted Secondary structure 


...............................













..



Query SS confidence 




. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




















. .




















Query Sequence  APTAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VAKIEAPLLLHFAELDTRINE. . GWPAYEAALKANNKVYEAYIY
Query Conservation       ...............................      
 
   
  
   
 ..        
   
        
Alig confidence 




...............................




















..




















Template Conservation                                             


  
  
  
        
   
   
        
Template Sequence  VNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQ
Template Known Secondary structure  S
GGGS
S
TT
T

GGG


TT
TT





T

Template Predicted Secondary structure 































Template SS confidence 















































































   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   243......250.........260.........270........
Predicted Secondary structure 

















Query SS confidence 



































Query Sequence  PGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS
Query Conservation 

  


                      

   
 
Alig confidence 






..........


















Template Conservation   
  
  ..........      
   
 
    
 
Template Sequence  TGYDHSY. . . . . . . . . . FFISSFIDQHLVFHHQYLS
Template Known Secondary structure  TT

SS..........
Template Predicted Secondary structure 





..........

Template SS confidence 



































   254.....260 .........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions