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Job DescriptionQ7DFU6
Confidence98.69%DateThu Jan 5 12:37:40 GMT 2012
Rank223Aligned Residues177
% Identity15%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  LVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAI
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Template Sequence  VVLQGLPMVARKTLFMLPDGGGSAFSYASLPR. LKS. DTAVVGLNCPYARDPENMN. . . . . . . . . . CTHGAMIESFCNEI
Template Known Secondary structure  S
TTTSS

TT

GGGGTTS

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TTTT
GGG

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   1855....1860.........1870.........1880...... ... 1890.........1900........ .1910.........1920..
 
   151........160.........170.........180.........190...
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Query Sequence  EFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RRRQPR. . . . GPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDG
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SS....

TTT

S

SS






TTTTTTSSSS
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   1923..... .1930.........1940.........1950.........1960.........1970.........1980.........1990........
 
   194.....200.........210.........220.........230..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKA
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Template Sequence  STEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP. . . .
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   19992000.........2010.........2020.........2030.........2040.........2050.........2060.........2070....
 
   233......240.........250.........260.........270........
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Query Sequence  NNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS
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Template Sequence  . GASFDIVRADGANHFTLMQ. . . . . . . . . . KEHVSIISDLIDRVMA
Template Known Secondary structure  .T

TTGGGS..........TTTTT
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   2075....2080.........2090... ......2100.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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