Job Description Q7DFU6 Confidence 98.38% Date Thu Jan 5 12:37:40 GMT 2012 Rank 245 Aligned Residues 108 % Identity 19% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		67	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure										.	.																		.	.	.																		.
Query SS confidence										.	.																		.	.	.																		.
Query Sequence		V	R	G	Y	L	V	K	P	.	.	A	K	M	S	G	K	T	P	A	V	V	V	V	H	E	N	R	.	.	.	G	L	N	P	Y	I	E	D	V	A	R	R	V	A	K	A	G	.	Y	I	A	L	A	P	D	G	L	S	S	V	G	G	Y	P	G	N	D	D	K	G	R	E	L	Q	Q	Q	V	D	P	T
Query Conservation										.	.																		.	.	.																		.
Alig confidence										.	.																		.	.	.								.	.									.																					.	.	.	.	.	.
Template Conservation																																							.	.																														.	.	.	.	.	.
Template Sequence		L	Y	L	N	I	Y	V	P	T	I	R	D	S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	.	.	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	.	.	.	.	.	.	Q	A	A	K	G	N
Template Known Secondary structure													S			S											S	S	S	S	S			T	T	T	S		.	.									T																	B		S	S	.	.	.	.	.	.	S	S		B
Template Predicted Secondary structure																																							.	.																														.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		N	L	M	N	D	F	F	A	A	I	E	F	M	Q	R	Y	.	.	.	.	P	Q	A	T	G	K	V	G	I	T	G	F	C	Y	G	G	G	V	S	N	A	A	A	V	A	Y
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.
Template Conservation
Template Sequence		Y	G	L	L	D	L	I	Q	A	L	R	W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H
Template Known Secondary structure																		G	G	G	G	T												T										T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions