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Job DescriptionQ7DFU6
Confidence99.47%DateThu Jan 5 12:37:40 GMT 2012
Rank189Aligned Residues181
% Identity18%Templatec3a2nF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:haloalkane dehalogenase; PDBTitle: crystal structure of dbja (wild type type ii p21)
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  YLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAA
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Template Sequence  SMAYRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSP. VAHCIAPDLIGFGQSGKPD. . . . . . . . IAYRFFDHVRYLDAF
Template Known Secondary structure  S
TTS


TT

GGGGTTTTT.TS

TTSTTS


S........S


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   18.20.........30.........40.........50.... .....60.........70... ......80........
 
   150.........160.........170.........180.........190.....
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Query Sequence  IEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IEQRGVT. . . . . SAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTP
Template Known Secondary structure  T

.....S
TTT


BSSGGGTT



GGGTST
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   8990..... ....100.........110.........120.........130.........140.........150.........160...
 
   196...200.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . APTADVAKIEAP
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Template Sequence  GEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYP
Template Known Secondary structure  TTTT
TT
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TT

STGGGS
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S
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   208.210.........220.........230.........240.........250.........260.........270.....
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Query Sequence  LLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDK
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Template Sequence  KLLFTGEPGALVS. . . PEFAERFAASLTRCALIRLGAGLHYLQ. . . . . . . . EDHADAIGRSVAGWIAG
Template Known Secondary structure 
SSS
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S
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   244.....250...... ...260.........270.........280... ......290.........300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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