Job Description Q7DFU6 Confidence 99.94% Date Thu Jan 5 12:37:40 GMT 2012 Rank 55 Aligned Residues 213 % Identity 13% Template c2zshA_ PDB info PDB header:hormone receptor Chain: A: PDB Molecule:probable gibberellin receptor gid1l1; PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		A	L	A	T	Q	V	E	F	T	D	P	E	I	V	A	E	Y	I	T	Y	P	S	P	N	G	H	G	E	V	R	G	Y	L	V	K	P	A	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	K	T	P	A	V	V	V	V	H	E	N	R	.	.	.	.	.	G	L	N	P	Y	I
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		R	K	V	T	A	N	A	N	P	V	D	G	V	F	S	F	D	V	L	I	D	R	R	I	N	.	.	.	L	L	S	R	V	Y	R	P	A	Y	A	D	Q	E	Q	P	P	S	I	L	D	L	E	K	P	V	D	G	D	I	V	P	V	I	L	F	F	H	G	G	S	F	A	H	S	S	A	N	S	A	I	Y
Template Known Secondary structure			B					S	S		B	T	T										T	T	T	T	.	.	.											T	T		S	S				T	T	S	T	T					S	S	S										S	T	T	T	S			T	T	B
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure												.																																																		.	.	.	.	.	.
Query SS confidence												.																																																		.	.	.	.	.	.
Query Sequence		E	D	V	A	R	R	V	A	K	A	.	G	Y	I	A	L	A	P	D	G	L	S	S	V	G	G	Y	P	G	N	D	D	K	G	R	E	L	Q	Q	Q	V	D	P	T	N	L	M	N	D	F	F	A	A	I	E	F	M	Q	R	Y	.	.	.	.	.	.	P	Q	A	T	G	K	V	G	I	T	G	F	C	Y
Query Conservation												.																																																		.	.	.	.	.	.
Alig confidence												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	L	C	R	R	L	V	G	L	C	K	C	V	V	V	S	V	N	Y	R	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	N	P	Y	P	C	A	Y	D	D	G	W	I	A	L	N	W	V	N	S	R	S	W	L	K	S	K	K	D	S	K	V	H	I	F	L	A	G	D	S	S
Template Known Secondary structure													T	S										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		T	T															T		G	G	G			T	T	T	S	S									T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.																																																.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	G	V	S	N	A	A	A	V	A	Y	P	E	.	.	.	.	L	A	C	A	V	P	F	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	A	P	T	A
Query Conservation																.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	N	I	A	H	N	V	A	L	R	A	G	E	S	G	I	D	V	L	G	N	I	L	L	N	P	M	F	G	G	N	E	R	T	E	S	E	K	S	L	D	G	K	Y	F	V	T	V	R	D	R	D	W	Y	W	K	A	F	L	P	E	G	E	D	R	E	H	P	A	C	N	P	F	S	P	R	G	K	S
Template Known Secondary structure															T	T	T										S						S	S									T	T	T	S	S														S		T	T			T	T	S	T	T	T		T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	A	K	I	E	A	P	L	L	L	H	F	A	E	L	D	T	R	I	N	E	G	W	P	A	Y	E	A	A	L	K	A	N	N	K	V	Y	E	A	Y	I	Y	P	G	V	N	H	G	F	H	N	D	S	T	P	R	Y	D	K	S	A	A	D	L	A	W	Q	R	T	L	K	W	F	D
Query Conservation
Alig confidence																							.																															.	.	.	.
Template Conservation																							.																															.	.	.	.
Template Sequence		L	E	G	V	S	F	P	K	S	L	V	V	V	A	G	L	D	L	I	R	D	.	W	Q	L	A	Y	A	E	G	L	K	K	A	G	Q	E	V	K	L	M	H	L	E	K	A	T	V	G	F	Y	L	.	.	.	.	L	P	N	N	N	H	F	H	N	V	M	D	E	I	S	A	F	V	N
Template Known Secondary structure			T	T												T	T	S	T	T			.												T	T									T	T			T	T	T	T	S	.	.	.	.	S	S		S
Template Predicted Secondary structure																							.																															.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions