Return to main results Retrieve Phyre Job Id

Job DescriptionQ7DFU6
Confidence99.90%DateThu Jan 5 12:37:40 GMT 2012
Rank82Aligned Residues188
% Identity18%Templatec2fx5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:lipase; PDBTitle: pseudomonas mendocina lipase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970...... ...80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure 


...





























Query SS confidence 







. . .




































































Query Sequence  GYLVKPAK. . . MSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMND
Query Conservation    
  
  ...     
 

  

  
        
  

  

 

  
                             
Alig confidence 







...













































............










Template Conservation    
  
          



  

              


 
 



         ............           
Template Sequence  CRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTG. . . . . . . . . . . . REMLACLDYLV
Template Known Secondary structure  SSTTGGG



TT

GGGGT


S

TTS............
Template Predicted Secondary structure 





























............
Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90 .........100.
 
   146...150.........160 .........170.........180.........190.. .......200.........210.........220.
Predicted Secondary structure 




.











...



















Query SS confidence 














.































. . .




























Query Sequence  FFAAIEFMQRYPQAT. GKVGITGFCYGGGVSNAAAVAYPELACAVPFY. . . GRQAPTADVAKIEAPLLLHFAELDTRINE
Query Conservation    

   
       .  
   
 
 

  
   
             ...              
 
   
  
   
 
Alig confidence 














.































...




























Template Conservation               

  

 
 


 

  

 

      
 
   
                 
 
   
  
    
Template Sequence  RENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQDTRVRTTAPIQPYTLGLGHDSASQRRQQGPMFLMSGGGDTIAFP
Template Known Secondary structure  SSSSTTTTTTTSTT



SSTT

GGGGG

SS
TT
SSS
Template Predicted Secondary structure 












































Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   222.......230.........240.........250.........260.........270.......
Predicted Secondary structure 




















Query SS confidence 























































Query Sequence  GWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYL
Query Conservation          
   
        

  


                      

   
Alig confidence 

.




































........







Template Conservation    .        
  
       

 
              ........ 


   
Template Sequence  YL. NAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPS. . . . . . . . TAWFRFQL
Template Known Secondary structure  .T
SS
SS

TTSSTTT
GGG........
Template Predicted Secondary structure  .
















........
Template SS confidence 























































   182. ......190.........200.........210.........220 ........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions