Job Description Q7DFU6 Confidence 100.00% Date Thu Jan 5 12:37:40 GMT 2012 Rank 18 Aligned Residues 218 % Identity 20% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		Q	V	E	F	T	D	P	E	I	V	A	E	Y	I	T	Y	P	S	P	N	G	H	G	E	V	R	G	Y	L	V	K	P	A	K	M	S	G	K	T	P	A	V	V	V	V	H	E	N	R	G	L	N	.	.	P	Y	I	E	D	V	A	R	R	V	A	K	A	G	Y	I	A	L	A	P	D	G	L	S	S	V
Query Conservation																																																						.	.
Alig confidence																								.																														.	.
Template Conservation																								.
Template Sequence		H	L	T	F	D	P	A	D	F	R	V	E	Q	V	F	Y	P	S	K	D	G	T	.	K	V	P	M	F	I	V	R	R	K	D	A	K	G	P	L	P	T	L	L	Y	G	Y	G	G	F	N	V	A	L	T	P	W	F	S	A	G	F	M	T	W	I	D	S	G	G	A	F	A	L	A	N	L	R	G	G	G
Template Known Secondary structure				S	S		G	G	G											T	T	S		.										T	T			S												T	T																T	T	T									T	T	S	S
Template Predicted Secondary structure																								.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																										.																							.												.	.	.	.	.
Query SS confidence																																										.																							.												.	.	.	.	.
Query Sequence		G	G	Y	P	G	N	D	D	K	G	R	E	L	Q	Q	Q	V	D	P	T	N	L	M	N	D	F	F	A	A	I	E	F	M	Q	R	Y	P	Q	A	T	.	G	K	V	G	I	T	G	F	C	Y	G	G	G	V	S	N	A	A	A	V	A	Y	.	P	E	L	A	C	A	V	P	F	Y	G	.	.	.	.	.
Query Conservation																																										.																							.												.	.	.	.	.
Alig confidence																				.	.	.	.																			.																							.												.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		E	Y	G	D	A	W	H	D	A	G	R	R	D	K	K	Q	N	V	.	.	.	.	F	D	D	F	I	A	A	G	E	W	L	I	A	N	G	V	T	P	R	H	G	L	A	I	E	G	G	S	N	G	G	L	L	I	G	A	V	T	N	Q	R	P	D	L	F	A	A	A	S	P	A	V	G	V	M	D	M	L
Template Known Secondary structure		T	T							T	T	S	G	G	G	T				.	.	.	.														T	T	S	S		T	T								T														G	G	G		S						S					T	T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.					.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
																														194	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.															.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.															.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	A	P	T	A	D	V	A	K	I	E	A	.	.	P	L	L	L	H	F	A	E	L	D	T	R	I	N	.	E	G	W	P	A	Y	E	A	A	L	K	A	N	N	K	V	Y	E	A	Y	I	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.															.
Template Conservation
Template Sequence		R	F	D	Q	F	T	A	G	R	Y	W	V	D	D	Y	G	Y	P	E	K	E	A	D	W	R	V	L	R	R	Y	S	P	Y	H	N	V	R	S	G	V	D	Y	P	A	I	L	V	T	T	A	D	T	D	D	R	V	V	P	G	H	S	F	K	Y	T	A	A	L	Q	T	A	A	I	G	P	K	P	H	L	I
Template Known Secondary structure		S	G	G	G	S	T	T	G	G	G	G							T	T	S									T	T		G	G	G				T	T	S											S			S	S	S		T													S				S	S
Template Predicted Secondary structure
Template SS confidence
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	V	N	H	G	F	H	N	D	S	T	P	R	Y	D	K	S	A	A	D	L	A	W	Q	R	T	L	K	W	F	D	K	Y	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	E	P	I	.	.	.	.	.	.	.	.	.	.	.	.	D	K	Q	I	E	E	T	A	D	V	Q	A	F	L	A	H	F	T
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		686	.	.	.	690													.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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