Job Description Q7DFU6 Confidence 100.00% Date Thu Jan 5 12:37:40 GMT 2012 Rank 10 Aligned Residues 221 % Identity 20% Template c1qfmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (prolyl oligopeptidase); PDBTitle: prolyl oligopeptidase from porcine muscle Resolution 1.40 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																	.	.																			.	.	.
Query SS confidence																																	.	.																			.	.	.
Query Sequence		F	T	D	P	E	I	V	A	E	Y	I	T	Y	P	S	P	N	G	H	G	E	V	R	G	Y	L	V	K	P	A	K	.	.	M	S	G	K	T	P	A	V	V	V	V	H	E	N	R	G	L	N	.	.	.	P	Y	I	E	D	V	A	R	R	V	A	K	A	G	Y	I	A	L	A	P	D	G	L	S	S	V
Query Conservation																																	.	.																			.	.	.
Alig confidence																					.												.	.																			.	.	.
Template Conservation																					.
Template Sequence		I	D	A	S	D	Y	Q	T	V	Q	I	F	Y	P	S	K	D	G	T	.	K	I	P	M	F	I	V	H	K	K	G	I	K	L	D	G	S	H	P	A	F	L	Y	G	Y	G	G	F	N	I	S	I	T	P	N	Y	S	V	S	R	L	I	F	V	R	H	M	G	G	V	L	A	V	A	N	I	R	G	G	G
Template Known Secondary structure				G	G	G											T	T	S		.										T	T				S	S		S										T	T																												T	T	S	S
Template Predicted Secondary structure																					.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																										.																																				.	.	.	.
Query SS confidence																																										.																																				.	.	.	.
Query Sequence		G	G	Y	P	G	N	D	D	K	G	R	E	L	Q	Q	Q	V	D	P	T	N	L	M	N	D	F	F	A	A	I	E	F	M	Q	R	Y	P	Q	A	T	.	G	K	V	G	I	T	G	F	C	Y	G	G	G	V	S	N	A	A	A	V	A	Y	P	E	L	A	C	A	V	P	F	Y	G	R	Q	.	.	.	.
Query Conservation																																										.																																				.	.	.	.
Alig confidence																			.	.	.	.																				.																																				.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		E	Y	G	E	T	W	H	K	G	G	I	L	A	N	K	Q	N	.	.	.	.	C	F	D	D	F	Q	C	A	A	E	Y	L	I	K	E	G	Y	T	S	P	K	R	L	T	I	N	G	G	S	N	G	G	L	L	V	A	T	C	A	N	Q	R	P	D	L	F	G	C	V	I	A	Q	V	G	V	M	D	M	L
Template Known Secondary structure		T	T							T	T	S	G	G	G	T			.	.	.	.															T	T	S			G	G	G							T														G	G	G		S						S					T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
																															196	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.															.														.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.															.														.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	T	A	D	V	A	K	I	E	A	.	.	.	.	.	.	P	L	L	L	H	F	A	E	L	D	T	R	I	N	.	E	G	W	P	A	Y	E	A	A	L	K	A	N	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.															.														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.															.														.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	H	K	Y	T	I	G	H	A	W	T	T	D	Y	G	S	D	S	K	Q	H	F	E	W	L	I	K	Y	S	P	L	H	N	V	K	L	P	E	A	D	D	I	Q	Y	P	S	M	L	L	L	T	A	D	H	D	D	R	V	V	P	L	H	S	L	K	F	I	A	T	L	Q	Y	I	V	G	R	S	R	K
Template Known Secondary structure		T	G	G	G	S	T	T	G	G	G	G								S												G	G	G						S	S	T	T												T	T			S	S		T														T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
			234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	K	V	Y	E	A	Y	I	Y	P	G	V	N	H	G	F	H	N	D	S	T	P	R	Y	D	K	S	A	A	D	L	A	W	Q	R	T	L	K	W	F	D	K	Y	L
Query Conservation		.
Alig confidence		.																			.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		Q	N	N	P	L	L	I	H	V	D	T	K	A	G	H	G	A	G	K	.	.	.	.	.	.	P	T	A	K	V	I	E	E	V	S	D	M	F	A	F	I	A	R	C	L
Template Known Secondary structure				S								S	S			S	S	T	T		.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.							.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions