Job Description P77360 Confidence 100.00% Date Wed Jan 25 15:21:11 GMT 2012 Rank 46 Aligned Residues 312 % Identity 17% Template c2vcyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:trans-2-enoyl-coa reductase; PDBTitle: crystal structure of 2-enoyl thioester reductase of human2 fas ii Resolution 2.41 Å

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		3	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		T	M	L	A	A	Y	L	P	G	N	S	T	.	.	.	.	V	D	L	R	E	V	A	V	P	T	P	G	I	N	Q	V	L	I	K	M	K	S	S	G	I	C	G	S	D	V	H	Y	I	Y	H	Q	H	R	A	T	A	A	A	P	D	K	P	L	Y	Q	G	F	I	N	G	H	E	P	C	G	Q	I	V	A
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																																										.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		R	V	R	A	L	V	Y	G	H	H	G	D	P	A	K	V	V	E	L	K	N	L	E	L	A	A	V	R	G	S	D	V	R	V	K	M	L	A	A	P	I	N	P	S	D	I	N	M	I	Q	G	N	Y	G	L	L	P	.	.	.	.	.	.	.	E	L	P	A	V	G	G	N	E	G	V	A	Q	V	V	A
Template Known Secondary structure									S	S		S																		S	S																					T		S	S				.	.	.	.	.	.	.		S	S					S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	Q	G	C	R	H	F	K	E	G	D	R	V	L	V	Y	H	I	S	G	C	G	F	C	P	N	C	R	R	G	F	P	I	S	C	T	G	E	G	K	A	A	Y	G	W	Q	R	D	G	G	H	A	E	Y	L	L	A	E	E	K	D	L	I	L	L	P	D	A	L	S	Y	E	D	G	A	F	I	S	C
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	S	N	V	T	G	L	K	P	G	D	W	V	I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	G	L	G	T	W	R	T	E	A	V	F	S	E	E	A	L	I	Q	V	P	S	D	I	P	L	Q	S	A	A	T	L	G	V
Template Known Secondary structure				T	T			S			T	T						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S				B	S						T	T	S						S	S	S									T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		G	V	G	T	A	Y	E	G	I	L	R	G	E	V	S	G	S	D	N	V	L	V	V	G	L	G	P	V	G	M	M	A	M	M	L	A	K	G	R	G	A	.	.	.	.	K	R	I	I	G	V	D	M	L	P	E	R	L	A	M	A	K	Q	L	G	V	M	D	H	G	Y	L	A	T	T	E	G	L	P	Q
Query Conservation																																											.	.	.	.
Alig confidence																																											.	.	.	.
Template Conservation
Template Sequence		N	P	C	T	A	Y	R	M	L	M	D	F	E	Q	L	Q	P	G	D	S	V	I	Q	N	A	S	N	S	G	V	G	Q	A	V	I	Q	I	A	A	A	L	G	L	R	T	I	N	V	V	R	D	R	P	D	I	Q	K	L	S	D	R	L	K	S	L	G	A	E	H	V	I	T	E	E	E	L	R	R	P	E
Template Known Secondary structure												S	S	S				T	T						S	S	T	T	S												T	T	T											T	T										T	T	T		S									S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.
Predicted Secondary structure																																										.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	A	E	L	T	H	G	G	A	D	V	A	L	D	C	S	G	N	A	A	G	R	L	L	A	L	Q	S	T	A	D	W	G	R	V	V	Y	I	G	.	E	T	G	K	V	E	F	E	V	S	A	D	L	M	H	H	Q	R	R	I	I	G	S	W	V	T	S	.	.	.	.	.	.	.	.	.	.	L	F
Query Conservation																																										.																												.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	N	F	F	K	D	M	P	Q	P	R	L	A	L	N	C	V	G	G	K	S	S	T	E	L	L	R	Q	L	A	R	G	G	T	M	V	T	Y	G	G	M	A	K	Q	P	V	V	A	S	V	S	L	L	I	F	K	D	L	K	L	R	G	F	W	L	S	Q	W	K	K	D	H	S	P	D	Q	F	K	E
Template Known Secondary structure		T	T	T	T	T	T	S	S				S					S	S														T	T										T	T	S		B										S																S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		H	M	E	K	C	A	H	D	L	T	D	W	K	L	W	P	R	N	A	I	T	H	R	F	S	L	E	Q	A	G	D	A	Y	A	L	M	A	S	G	K	C	.	G	K	V	V	I	N	F
Query Conservation																																											.
Alig confidence																		.	.																								.
Template Conservation																		.	.
Template Sequence		L	I	L	T	L	C	D	L	I	R	R	G	Q	L	T	A	.	.	P	A	C	S	Q	V	P	L	Q	D	Y	Q	S	A	L	E	A	S	M	K	P	F	I	S	S	K	Q	I	L	T	M
Template Known Secondary structure												T	T	S	S			.	.								G	G	G											T	T			S
Template Predicted Secondary structure																		.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions