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Job DescriptionP77360
Confidence100.00%DateWed Jan 25 15:21:11 GMT 2012
Rank36Aligned Residues315
% Identity23%Templatec2h6eA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-arabinose 1-dehydrogenase; PDBTitle: crystal structure of the d-arabinose dehydrogenase from sulfolobus2 solfataricus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKTMLAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMG
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Template Sequence  MVKSKAALLKKFS. . . . EDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQG. . . . . . FRLPIILGHENAGTIVEVG
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B

S

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TT


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   1........10... ......20.........30.........40.........50. ........60.........70
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  QGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGEGKAAYGWQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCGV
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Template Sequence  . ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPG. . QTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG
Template Known Secondary structure  .TT



TT

S
B

S
STTGGGT
GGG
TT
B
BT..TTB

SSBSS
GGGSSS
GGGGT
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   76...80.........90.........100.........110..... ....120.........130.........140.........150..
 
   161........ 170.........180.........190.........200.........210.........220.........230......
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Query Sequence  GTAYEGILR. . . . GEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDHGYLATTEGLPQII
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Template Sequence  TTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE. LGADYVSEMKDAESLIN
Template Known Secondary structure  TT
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S
TT

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   153......160.........170.........180.........190.........200.........210.... .....220.........230.
 
   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  AELTHGGADVALDCSGNAAGRLLALQSTADWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWK
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Template Sequence  KLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGK
Template Known Secondary structure  TT

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SS




TT


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   232.......240.........250.........260.........270.........280.........290.........300.........310.
 
   317..320.........330..
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Query Sequence  LWPRNAITHRFSLEQA
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Template Sequence  IKP. . . YIIKVPLGRQ
Template Known Secondary structure  S

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   312.. .....320....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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