Job Description P77360 Confidence 100.00% Date Wed Jan 25 15:21:11 GMT 2012 Rank 54 Aligned Residues 311 % Identity 21% Template c1y9eB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein yhfp; PDBTitle: crystal structure of bacillus subtilis protein yhfp with2 nad bound Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		M	L	A	A	Y	L	P	G	N	S	T	.	.	.	V	D	L	R	E	V	A	V	P	T	P	G	I	N	Q	V	L	I	K	M	K	S	S	G	I	C	G	S	D	V	H	Y	I	Y	H	Q	H	R	A	T	A	A	A	P	D	K	P	L	Y	Q	G	F	I	N	G	H	E	P	C	G	Q	I	V	A	M	G
Query Conservation													.	.	.
Alig confidence													.	.	.																																										.	.	.	.	.	.	.																.	.
Template Conservation																																																									.	.	.	.	.	.	.																.	.
Template Sequence		F	Q	A	L	Q	A	E	K	N	A	D	D	V	S	V	H	V	K	T	I	S	T	E	D	L	P	K	D	G	V	L	I	K	V	A	Y	S	G	I	N	Y	K	D	G	L	A	G	K	A	G	G	N	I	V	R	.	.	.	.	.	.	.	E	Y	P	L	I	L	G	I	D	A	A	G	T	V	V	.	.	S
Template Known Secondary structure				B							T	T					B						G	G	G	S		S	S	S																			S	T	T		S				.	.	.	.	.	.	.	S	S						S								.	.	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.																.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	C	R	H	F	K	E	G	D	R	V	L	V	Y	H	I	S	G	C	G	F	C	P	N	C	R	R	G	F	P	I	S	C	T	G	E	G	K	A	A	Y	G	W	Q	R	D	G	G	H	A	E	Y	L	L	A	E	E	K	D	L	I	L	L	P	D	A	L	S	Y	E	D	G	A	F	I	S	C	G	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	D	P	R	F	A	E	G	D	E	V	I	A	T	S	Y	E	L	G	V	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	G	L	S	E	Y	A	S	V	P	G	D	W	L	V	P	L	P	Q	N	L	S	L	K	E	A	X	V	Y	G	T	A	G
Template Known Secondary structure			S		T	T			T	T							S	T	T	B	T	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	B	S						G	G	G						T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																								.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		161	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		G	T	A	Y	E	G	.	.	.	.	I	L	R	G	E	V	S	G	S	D	N	V	L	V	V	G	L	G	P	V	G	M	M	A	M	M	L	A	K	G	R	G	A	K	R	I	I	G	V	D	M	L	P	E	R	L	A	M	A	K	Q	L	G	V	M	D	H	G	Y	L	A	T	T	E	G	L	P	Q	I	I
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																																																											.	.
Template Conservation																																																																						.	.
Template Sequence		F	T	A	A	L	S	V	H	R	L	E	Q	N	G	L	S	P	E	K	G	S	V	L	V	T	G	A	T	G	G	V	G	G	I	A	V	S	X	L	N	K	R	G	Y	D	V	V	A	S	T	G	N	R	E	A	A	D	Y	L	K	Q	L	G	A	S	E	V	I	.	.	S	R	E	D	V	Y	D	G	T	L
Template Known Secondary structure													T	T	T			T	T	S						S	S	T	T	S													T	T								S		T	T	T							T	T		S				.	.						S	S	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																												.	.	.	.	.	.
Query SS confidence																																								.																												.	.	.	.	.	.
Query Sequence		A	E	L	T	H	G	G	A	D	V	A	L	D	C	S	G	N	A	A	G	R	L	L	A	L	Q	S	T	A	D	W	G	R	V	V	Y	I	G	.	E	T	G	K	V	E	F	E	V	S	A	D	L	M	H	H	Q	R	R	I	I	G	S	W	V	T	S	.	.	.	.	.	.	L	F	H	M	E	K	C	A
Query Conservation																																								.																												.	.	.	.	.	.
Alig confidence																				.																				.																												.	.	.	.	.	.
Template Conservation																				.
Template Sequence		K	A	L	S	K	Q	Q	W	Q	G	A	V	D	P	V	G	G	K	.	Q	L	A	S	L	L	S	K	I	Q	Y	G	G	S	V	A	V	S	G	L	T	G	G	G	E	V	P	A	T	V	Y	P	F	I	L	R	G	V	S	L	L	G	I	D	S	V	Y	C	P	X	D	V	R	A	A	V	W	E	R	X	S
Template Known Secondary structure			S	S						S					S					.							T	T			T	T									T	T		S						S															S	T	T													T	T
Template Predicted Secondary structure																				.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		H	D	L	T	D	W	K	L	W	P	R	N	A	I	T	H	R	F	S	L	E	Q	A	G	D	A	Y	A	L	M	A	S	G	K	C	.	G	K	V	V	I	N	F
Query Conservation																																					.
Alig confidence												.	.																								.
Template Conservation												.	.
Template Sequence		S	D	L	K	P	D	Q	L	L	T	.	.	I	V	D	R	E	V	S	L	E	E	T	P	G	A	L	K	D	I	L	Q	N	R	I	Q	G	R	V	I	V	K	L
Template Known Secondary structure		T	T	T			S		S	G	G	.	.	G							S	T	T								S	S	S	S			S	S					B
Template Predicted Secondary structure												.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions